diff --git a/VERSIONLOG.md b/VERSIONLOG.md index f3413531..13642510 100644 --- a/VERSIONLOG.md +++ b/VERSIONLOG.md @@ -1,5 +1,9 @@ # TACA Version Log +## 20251007.2 + +Skip check for pod5/fast5 files + ## 20251007.1 Skip toulligqc on ONT data if pod5/fast5 is missing diff --git a/taca/__init__.py b/taca/__init__.py index 84076dec..41af0b3f 100644 --- a/taca/__init__.py +++ b/taca/__init__.py @@ -1,3 +1,3 @@ """Main TACA module""" -__version__ = "1.6.6" +__version__ = "1.6.7" diff --git a/taca/nanopore/ONT_run_classes.py b/taca/nanopore/ONT_run_classes.py index 907763c3..ae460cde 100644 --- a/taca/nanopore/ONT_run_classes.py +++ b/taca/nanopore/ONT_run_classes.py @@ -111,12 +111,12 @@ def assert_contents(self): assert self.has_file("/final_summary*.txt") # Raw seq files - assert any( - [ - dir in os.listdir(self.run_abspath) - for dir in ["pod5", "pod5_pass", "fast5", "fast5_pass"] - ] - ) + # assert any( + # [ + # dir in os.listdir(self.run_abspath) + # for dir in ["pod5", "pod5_pass", "fast5", "fast5_pass"] + # ] + # ) TODO: put this back when we want to run toulligqc again # NGI files from instrument assert self.has_file("/pore_count_history.csv")