Working to fix the difference between BSD and GNU versions of sed.

The genoatt file was applying sed to the files in test using -i, but without a new file ending. In BSD sed this was causing it to pick up the `-E` flag. I've fixed it to force a new file name and then clean up the changed files.

Author: SimonGoring

genoatt.sh

@@ -29,20 +29,20 @@ run_oatt() {
 
     # oatts is a bit silly in picking its variables.  We need to make sure that we're
     # getting the proper polygons, and making sure altmin/altmax are appropriate.
-    find ./test -type f -exec sed -i -E "s/'loc':\ '\{.*?\}'/'loc': '{\"type\":\"Polygon\",\"coordinates\":[[[-104.053249,41.001406],[-104.675999,41.000957],[-104.855273,40.998048],[-105.277138,40.998173],[-105.730421,40.996886],[-106.217573,40.997734],[-106.453859,41.002057],[-106.857773,41.002663],[-107.625624,41.002124],[-108.250649,41.000114],[-108.884138,41.000094],[-109.050076,41.000659],[-109.048044,40.619231],[-109.050946,40.444368],[-109.050615,39.87497],[-109.051363,39.497674],[-109.051512,39.126095],[-109.054189,38.874984],[-109.059541,38.719888],[-109.060062,38.275489],[-109.041762,38.16469],[-109.041058,37.907236],[-109.041865,37.530726],[-109.04581,37.374993],[-109.045223,36.999084],[-108.620309,36.999287],[-108.249358,36.999015],[-108.000623,37.000001],[-107.420913,37.000005],[-106.877292,37.000139],[-106.869796,36.992426],[-106.201469,36.994122],[-105.62747,36.995679],[-105.1208,36.995428],[-105.000554,36.993264],[-104.338833,36.993535],[-103.733247,36.998016],[-103.002199,37.000104],[-102.814616,37.000783],[-102.698142,36.995149],[-102.04224,36.993083],[-102.041974,37.352613],[-102.041574,37.680436],[-102.044644,38.045532],[-102.045324,38.453647],[-102.045388,38.813392],[-102.048449,39.303138],[-102.050422,39.646048],[-102.051744,40.003078],[-102.051725,40.537839],[-102.051614,41.002377],[-102.556789,41.002219],[-102.865784,41.001988],[-103.497447,41.001635],[-104.053249,41.001406]]]}'/g" {} \;
-    find ./test -type f -exec sed -i -E "s/'loc':\ \"\{.*?\}\"/'loc': '{\"type\":\"Polygon\",\"coordinates\":[[[-104.053249,41.001406],[-104.675999,41.000957],[-104.855273,40.998048],[-105.277138,40.998173],[-105.730421,40.996886],[-106.217573,40.997734],[-106.453859,41.002057],[-106.857773,41.002663],[-107.625624,41.002124],[-108.250649,41.000114],[-108.884138,41.000094],[-109.050076,41.000659],[-109.048044,40.619231],[-109.050946,40.444368],[-109.050615,39.87497],[-109.051363,39.497674],[-109.051512,39.126095],[-109.054189,38.874984],[-109.059541,38.719888],[-109.060062,38.275489],[-109.041762,38.16469],[-109.041058,37.907236],[-109.041865,37.530726],[-109.04581,37.374993],[-109.045223,36.999084],[-108.620309,36.999287],[-108.249358,36.999015],[-108.000623,37.000001],[-107.420913,37.000005],[-106.877292,37.000139],[-106.869796,36.992426],[-106.201469,36.994122],[-105.62747,36.995679],[-105.1208,36.995428],[-105.000554,36.993264],[-104.338833,36.993535],[-103.733247,36.998016],[-103.002199,37.000104],[-102.814616,37.000783],[-102.698142,36.995149],[-102.04224,36.993083],[-102.041974,37.352613],[-102.041574,37.680436],[-102.044644,38.045532],[-102.045324,38.453647],[-102.045388,38.813392],[-102.048449,39.303138],[-102.050422,39.646048],[-102.051744,40.003078],[-102.051725,40.537839],[-102.051614,41.002377],[-102.556789,41.002219],[-102.865784,41.001988],[-103.497447,41.001635],[-104.053249,41.001406]]]}'/g" {} \;
-    find ./test -type f -exec sed -i -E "s/'altmin':\ -*[0-9]+/'altmin':\ 10/g" {} \;
-    find ./test -type f -exec sed -i -E "s/'altmax':\ -*[0-9]+/'altmax':\ 100/g" {} \;
-    find ./test -type f -exec sed -i -E "s/'ageold':\ -*[0-9]+/'ageold':\ 10000/g" {} \;
-    find ./test -type f -exec sed -i -E "s/'ageyoung':\ -*[0-9]+/'ageyoung':\ 1000/g" {} \;
-    find ./test -type f -exec sed -i -E "s/'start':\ -*[0-9]+/'start':\ 1/g" {} \;
-    find ./test -type f -exec sed -i -E "s/'end':\ -*[0-9]+/'end':\ 10/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'loc':\ '\{.*?\}'/'loc': '{\"type\":\"Polygon\",\"coordinates\":[[[-104.053249,41.001406],[-104.675999,41.000957],[-104.855273,40.998048],[-105.277138,40.998173],[-105.730421,40.996886],[-106.217573,40.997734],[-106.453859,41.002057],[-106.857773,41.002663],[-107.625624,41.002124],[-108.250649,41.000114],[-108.884138,41.000094],[-109.050076,41.000659],[-109.048044,40.619231],[-109.050946,40.444368],[-109.050615,39.87497],[-109.051363,39.497674],[-109.051512,39.126095],[-109.054189,38.874984],[-109.059541,38.719888],[-109.060062,38.275489],[-109.041762,38.16469],[-109.041058,37.907236],[-109.041865,37.530726],[-109.04581,37.374993],[-109.045223,36.999084],[-108.620309,36.999287],[-108.249358,36.999015],[-108.000623,37.000001],[-107.420913,37.000005],[-106.877292,37.000139],[-106.869796,36.992426],[-106.201469,36.994122],[-105.62747,36.995679],[-105.1208,36.995428],[-105.000554,36.993264],[-104.338833,36.993535],[-103.733247,36.998016],[-103.002199,37.000104],[-102.814616,37.000783],[-102.698142,36.995149],[-102.04224,36.993083],[-102.041974,37.352613],[-102.041574,37.680436],[-102.044644,38.045532],[-102.045324,38.453647],[-102.045388,38.813392],[-102.048449,39.303138],[-102.050422,39.646048],[-102.051744,40.003078],[-102.051725,40.537839],[-102.051614,41.002377],[-102.556789,41.002219],[-102.865784,41.001988],[-103.497447,41.001635],[-104.053249,41.001406]]]}'/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'loc':\ \"\{.*?\}\"/'loc': '{\"type\":\"Polygon\",\"coordinates\":[[[-104.053249,41.001406],[-104.675999,41.000957],[-104.855273,40.998048],[-105.277138,40.998173],[-105.730421,40.996886],[-106.217573,40.997734],[-106.453859,41.002057],[-106.857773,41.002663],[-107.625624,41.002124],[-108.250649,41.000114],[-108.884138,41.000094],[-109.050076,41.000659],[-109.048044,40.619231],[-109.050946,40.444368],[-109.050615,39.87497],[-109.051363,39.497674],[-109.051512,39.126095],[-109.054189,38.874984],[-109.059541,38.719888],[-109.060062,38.275489],[-109.041762,38.16469],[-109.041058,37.907236],[-109.041865,37.530726],[-109.04581,37.374993],[-109.045223,36.999084],[-108.620309,36.999287],[-108.249358,36.999015],[-108.000623,37.000001],[-107.420913,37.000005],[-106.877292,37.000139],[-106.869796,36.992426],[-106.201469,36.994122],[-105.62747,36.995679],[-105.1208,36.995428],[-105.000554,36.993264],[-104.338833,36.993535],[-103.733247,36.998016],[-103.002199,37.000104],[-102.814616,37.000783],[-102.698142,36.995149],[-102.04224,36.993083],[-102.041974,37.352613],[-102.041574,37.680436],[-102.044644,38.045532],[-102.045324,38.453647],[-102.045388,38.813392],[-102.048449,39.303138],[-102.050422,39.646048],[-102.051744,40.003078],[-102.051725,40.537839],[-102.051614,41.002377],[-102.556789,41.002219],[-102.865784,41.001988],[-103.497447,41.001635],[-104.053249,41.001406]]]}'/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'altmin':\ -*[0-9]+/'altmin':\ 10/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'altmax':\ -*[0-9]+/'altmax':\ 100/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'ageold':\ -*[0-9]+/'ageold':\ 10000/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'ageyoung':\ -*[0-9]+/'ageyoung':\ 1000/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'start':\ -*[0-9]+/'start':\ 1/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'end':\ -*[0-9]+/'end':\ 10/g" {} \;
     # Cleaning up the limits & offset:
-    find ./test -type f -exec sed -i -E "s/'limit':\ -*[0-9]+/'limit':\ 10/g" {} \;
-    find ./test -type f -exec sed -i -E "s/'offset':\ -*[0-9]+/'offset':\ 0/g" {} \;
-    find ./test -type f -exec sed -i "s/\/[0-9]\{5,\}/\/500/g" {} \;
-    find ./test -type f -exec sed -i -E "s/'prec':\ [0-9\.]*?/'prec': 1000/g" {} \;
-    find ./test -type f -exec sed -i -E "s/'proj':\ [0-9\.]*?/'proj': 4326/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'limit':\ -*[0-9]+/'limit':\ 10/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'offset':\ -*[0-9]+/'offset':\ 0/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old "s/\/[0-9]\{5,\}/\/500/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'prec':\ [0-9\.]*?/'prec': 1000/g" {} \;
+    find ./test/*.js -type f -exec sed -i.old -E "s/'proj':\ [0-9\.]*?/'proj': 4326/g" {} \;
 
 }