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Merge pull request #1646 from NeuralEnsemble/black-formatting
Black formatting
2 parents f0a7fb9 + ebe1ff3 commit 201dbc7

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neo/io/__init__.py

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.. autoclass:: neo.io.MaxwellIO
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.. autoattribute:: extensions
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.. autoclass:: neo.io.MedIO
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.. autoattribute:: extensions

neo/rawio/axonrawio.py

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strings section:
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[uModifierNameIndex, uCreatorNameIndex, uProtocolPathIndex, lFileComment, lADCCChannelNames, lADCUnitsIndex
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lDACChannelNameIndex, lDACUnitIndex, lDACFilePath, nLeakSubtractADC]
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['', 'Clampex', '', 'C:/path/protocol.pro', 'some comment', 'IN 0', 'mV', 'IN 1', 'mV', 'Cmd 0', 'pA',
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['', 'Clampex', '', 'C:/path/protocol.pro', 'some comment', 'IN 0', 'mV', 'IN 1', 'mV', 'Cmd 0', 'pA',
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'Cmd 1', 'pA', 'Cmd 2', 'mV', 'Cmd 3', 'mV']
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Information on abf 1 and 2 formats is available here:

neo/rawio/intanrawio.py

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* http://intantech.com/files/Intan_RHD2000_data_file_formats.pdf
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* http://intantech.com/files/Intan_RHS2000_data_file_formats.pdf
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2020
Author: Samuel Garcia (Initial), Zach McKenzie & Heberto Mayorquin (Updates)
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"""

neo/rawio/medrawio.py

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"""
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Class for reading MED (Multiscale Electrophysiology Data) Format.
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Uses the dhn-med-py python package, created by Dark Horse Neuro, Inc.
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Authors: Dan Crepeau, Matt Stead

neo/rawio/neuronexusrawio.py

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* The *.xdat.json metadata file
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* The *_data.xdat binary file of all raw data
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* The *_timestamps.xdat binary file of the timestamp data
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Based on sample data is appears that the binary file is always a float32 format
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Other information can be found within the metadata json file
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The metadata file has a pretty complicated structure as far as I can tell
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a lot of which is dedicated to probe information, which won't be handle at the
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a lot of which is dedicated to probe information, which won't be handle at the
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the Neo level.
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It appears that the metadata['status'] provides most of the information necessary

neo/test/iotest/test_openephysbinaryio.py

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import unittest
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neo/test/iotest/test_openephysio.py

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import unittest
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neo/test/rawiotest/test_brainvisionrawio.py

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import unittest
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neo/test/rawiotest/test_micromedrawio.py

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import unittest
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