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neo/rawio/openephysbinaryrawio.py

Lines changed: 6 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -31,6 +31,11 @@ class OpenEphysBinaryRawIO(BaseRawIO):
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Neo OpenEphys
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block[n-1] experiment[n] New device start/stop
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segment[s-1] recording[s] New recording start/stop
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handle several signals stream
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handle events special npy data are respresented as array_annotations
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do not handle spikes at the moment can be implemented if user demand
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"""
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extensions = []
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rawmode = 'one-dir'
@@ -173,12 +178,6 @@ def _parse_header(self):
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self._t_start_segments[block_index][seg_index] = global_t_start
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self._t_stop_segments[block_index][seg_index] = global_t_stop
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# handle segment t_start
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# update t_start/t_stop with events
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# for block_index in range(nb_block):
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# for seg_index in range(nb_segment_per_block[block_index]):
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# pass
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# main header
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self.header = {}
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self.header['nb_block'] = nb_block
@@ -267,6 +266,7 @@ def _get_event_timestamps(self, block_index, seg_index, event_channel_index, t_s
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durations = None
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labels = d['labels']
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# TODO make the time slice
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# DO NOT MERGE BEFORE THIS!!!!!
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return timestamps, durations, labels
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def _rescale_event_timestamp(self, event_timestamps, dtype, event_channel_index):
@@ -361,7 +361,6 @@ def explore_folder(dirname):
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# TODO for later : gap checking
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signal_stream = d.copy()
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signal_stream['raw_filename'] = str(raw_filename)
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# signal_stream['name'] = raw_filename.parents[0]
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signal_stream['dtype'] = 'int16'
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signal_stream['timestamp0'] = timestamp0
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signal_stream['t_start'] = t_start

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