release stuff

Author: zm711

codemeta.json

@@ -8,7 +8,7 @@
   "downloadUrl": "https://files.pythonhosted.org/packages/08/4b/c863c6bff783e94c92cb814f6ae821b35e6463c5a66e809b6864d0c66b4e/neo-0.13.3.tar.gz",
   "issueTracker": "https://github.com/NeuralEnsemble/python-neo/issues",
   "name": "Neo",
-  "version": "0.13.3",
+  "version": "0.13.4",
   "identifier": "RRID:SCR_000634",
   "description": "Neo is a Python package for working with electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats, including Spike2, NeuroExplorer, AlphaOmega, Axon, Blackrock, Plexon, Tdt, and support for writing to a subset of these formats plus non-proprietary formats including HDF5.\n\nThe goal of Neo is to improve interoperability between Python tools for analyzing, visualizing and generating electrophysiology data by providing a common, shared object model. In order to be as lightweight a dependency as possible, Neo is deliberately limited to represention of data, with no functions for data analysis or visualization.\n\nNeo is used by a number of other software tools, including SpykeViewer (data analysis and visualization), Elephant (data analysis), the G-node suite (databasing), PyNN (simulations), tridesclous_ (spike sorting) and ephyviewer (data visualization).\n\nNeo implements a hierarchical data model well adapted to intracellular and extracellular electrophysiology and EEG data with support for multi-electrodes (for example tetrodes). Neo's data objects build on the quantities package, which in turn builds on NumPy by adding support for physical dimensions. Thus Neo objects behave just like normal NumPy arrays, but with additional metadata, checks for dimensional consistency and automatic unit conversion.",
   "applicationCategory": "neuroscience",
@@ -112,6 +112,7 @@
     { "@type": "Person", "givenName": "Kyu Hun", "familyName": "Lee"},
     { "@type": "Person", "givenName": "Xin", "familyName": "Niu"},
     { "@type": "Person", "givenName": "Anthony", "familyName": "Pinto"},
-    { "@type": "Person", "givenName": "Chris", "familyName": "Heydrick"}
+    { "@type": "Person", "givenName": "Chris", "familyName": "Heydrick"},
+    {"@type": "Person", "givenName": "Nikhil", "familyName": "Chandra"}
   ]
 }

doc/source/authors.rst

@@ -88,6 +88,7 @@ and may not be the current affiliation of a contributor.
 * Téo Lohrer
 * Anthony Pinto [41]
 * Xin Niu
+* Nikhil Chandra [40]
 
 1. Centre de Recherche en Neuroscience de Lyon, CNRS UMR5292 - INSERM U1028 - Universite Claude Bernard Lyon 1
 2. Unité de Neuroscience, Information et Complexité, CNRS UPR 3293, Gif-sur-Yvette, France

doc/source/releases.rst

@@ -6,6 +6,7 @@ Release notes
 .. toctree::
    :maxdepth: 1
 
+   releases/0.13.4.rst
    releases/0.13.3.rst
    releases/0.13.2.rst
    releases/0.13.1.rst

doc/source/releases/0.13.4.rst

@@ -0,0 +1,47 @@
+========================
+Neo 0.13.4 release notes
+========================
+
+22 October 2024
+
+This release of Neo contains bug fixes, a new IO for :code:`NeuroNexus`, drop of Python 3.8/NumPy 1.22, still with a focus on the planned 1.0 release.
+
+See all `pull requests`_ included in this release and the `list of closed issues`_.
+
+
+Updated dependencies
+--------------------
+
+Neo has a limit of NumPy >= 1.22.4, < 2.0.0
+Neo now supports Python >= 3.9
+
+CI Additions
+------------
+
+Neo has sped up the testing suite by ~15% and added additional testing for IOs: :class:`NeuralynxIO` and
+:class:`Plexon2IO`
+
+
+Addition of a New IO module
+---------------------------
+
+Neo now has support for reading NeuroNexus :code:`.xdat` files with the new :class:`NeuroNexusIO`.
+
+
+Bug fixes and improvements in IO modules
+----------------------------------------
+
+Bug fixes and/or improvements have been made to :class:`MaxwellIO`, :class:`NeuroNexusIO`,
+:class:`IntanIO`, :class:`Plexon2IO`, :class:`IgorIO`, :class:`SpikeGadgetsIO`, :class:`PlexonIO`,
+and :class:`BrainVisionRawIO`.
+
+
+Acknowledgements
+----------------
+
+Thanks to Zach McKenzie, Heberto Mayorquin, Samuel Garcia, Andrew Davison, Alessio Buccino, Nikhil Chandra, and Peter Steinmetz for their contributions to this release.
+
+
+.. _`pull requests`: https://github.com/NeuralEnsemble/python-neo/pulls?q=is%3Apr+is%3Aclosed+milestone%3A0.13.4
+
+.. _`list of closed issues`: https://github.com/NeuralEnsemble/python-neo/issues?q=is%3Aissue+is%3Aclosed+milestone%3A0.13.4

pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "neo"
-version = "0.14.0.dev0"
+version = "0.13.4"
 authors = [{name = "Neo authors and contributors"}]
 description = "Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats"
 readme = "README.rst"