black formatting

Author: apdavison

neo/io/neuronexusio.py

@@ -8,4 +8,4 @@ class NeuroNexusIO(NeuroNexusRawIO, BaseFromRaw):
 
     def __init__(self, filename):
         NeuroNexusRawIO.__init__(self, filename=filename)
-        BaseFromRaw.__init__(self, filename)
+        BaseFromRaw.__init__(self, filename)

neo/rawio/brainvisionrawio.py

@@ -107,7 +107,7 @@ def _parse_header(self):
                 units = cds[3]
             else:
                 units = "u"
-            units = units.replace("µ", "u") # Brainvision spec for specific unicode
+            units = units.replace("µ", "u")  # Brainvision spec for specific unicode
             chan_id = str(c + 1)
             if sig_dtype == np.int16 or sig_dtype == np.int32:
                 gain = float(res)

neo/rawio/intanrawio.py

@@ -189,7 +189,11 @@ def _parse_header(self):
                 dtype_size = np.dtype(stream_datatype).itemsize
                 n_samples = size_in_bytes // (dtype_size * num_channels)
                 signal_stream_memmap = np.memmap(
-                    file_path, dtype=stream_datatype, mode="r", shape=(n_samples, num_channels), order='C',
+                    file_path,
+                    dtype=stream_datatype,
+                    mode="r",
+                    shape=(n_samples, num_channels),
+                    order="C",
                 )
                 self._raw_data[stream_index] = signal_stream_memmap
 

neo/rawio/neuronexusrawio.py

@@ -37,7 +37,7 @@
 from pathlib import Path
 import json
 import datetime
-import sys 
+import sys
 import re
 
 import numpy as np
@@ -165,7 +165,7 @@ def _parse_header(self):
         # and because all data is stored in the same buffer stream for the moment all channels
         # will be in stream_id = 0. In the future this will be split into sub_streams based on
         # type but for now it will be the end-users responsability for this.
-        stream_id = '0'  # hard-coded see note above
+        stream_id = "0"  # hard-coded see note above
         for channel_index, channel_name in enumerate(channel_info["chan_name"]):
             channel_id = channel_info["ntv_chan_name"][channel_index]
             # 'ai0' indicates analog data which is stored as microvolts
@@ -223,11 +223,11 @@ def _parse_header(self):
 
         # date comes out as: '2024-07-01T13:04:49.4972245-04:00' so in ISO format
         datetime_string = self.metadata["status"]["start_time"]
-        
+
         # Python 3.10 and older expect iso format to only have 3 or 6 decimal places
         if sys.version_info.minor < 11:
             datetime_string = re.sub(r"(\.\d{6})\d+", r"\1", datetime_string)
-        
+
         rec_datetime = datetime.datetime.fromisoformat(datetime_string)
 
         bl_annotations = self.raw_annotations["blocks"][0]
@@ -297,4 +297,4 @@ def read_metadata(self, fname_metadata):
 # this is pretty useless right now, but I think after a
 # refactor with sub streams we could adapt this for the sub-streams
 # so let's leave this here for now :)
-stream_id_to_stream_name = {'0': "Neuronexus Allego Data"}
+stream_id_to_stream_name = {"0": "Neuronexus Allego Data"}

neo/test/rawiotest/test_neuronexusrawio.py

@@ -11,6 +11,4 @@ class TestNeuroNexusRawIO(
 ):
     rawioclass = NeuroNexusRawIO
     entities_to_download = ["neuronexus"]
-    entities_to_test = [
-        "neuronexus/allego_1/allego_2__uid0701-13-04-49.xdat.json"
-    ]
+    entities_to_test = ["neuronexus/allego_1/allego_2__uid0701-13-04-49.xdat.json"]