Merge branch 'staging' into dev_fang

Author: fangq

.github/workflows/build-deploy-neurojsonio.yml

@@ -0,0 +1,38 @@
+name: Deploy to Production
+
+on:
+  push:
+    branches:
+      - staging
+
+jobs:
+  deploy:
+    runs-on: ubuntu-22.04
+    env:
+      CI: false
+
+    steps:
+      - name: Check out the repository
+        uses: actions/checkout@v3
+
+      - name: Install dependencies
+        run: yarn install --frozen-lockfile
+
+      - name: Build React App for production
+        run: |
+          echo "Building for production at root /"
+          PUBLIC_URL="/" yarn build
+
+      - name: Copy JS libraries
+        run: |
+          mkdir -p build/js
+          cp -r public/js/* build/js/
+
+      - name: Deploy to neurojson.io
+        uses: NeuroJSON/[email protected]
+        with:
+          server: ${{ secrets.NEUROJ_IO_SERVER }}
+          username: ${{ secrets.NEUROJ_SERVER_USER }}
+          ssh_private_key: ${{ secrets.NEUROJ_SERVER_SSH_KEY }}
+          local_path: "./build/*"
+          remote_path: "${{ secrets.NEUROJ_CI_PATH }}"

.github/workflows/build-deploy-zodiac.yml

@@ -26,11 +26,16 @@ jobs:
         id: get_branch
         run: echo "BRANCH_NAME=${GITHUB_REF#refs/heads/}" >> $GITHUB_ENV
 
+      - name: Print GitHub Runner Public IP
+        run: |
+          echo "GitHub runner public IP:"
+          curl https://api.ipify.org
+
       - name: Build React App with Dynamic PUBLIC_URL
         run: |
           echo "Building for /dev/${{ env.BRANCH_NAME }}/"
           PUBLIC_URL="/dev/${{ env.BRANCH_NAME }}/" yarn build
-      
+
       - name: Copy JS libraries (jdata, bjdata etc.)
         run: |
           mkdir -p build/js

.github/workflows/validate.yml

@@ -8,8 +8,6 @@ on:
 jobs:
   validate:
     runs-on: ubuntu-latest
-    env:
-      CI: false
 
     steps:
       - name: Check out the repository
@@ -31,4 +29,4 @@ jobs:
           PUBLIC_URL="/dev/${{ github.head_ref }}/" yarn build
 
       - name: Run Security Audit (non-blocking)
-        run: yarn audit --level moderate || echo "Ignoring audit failure for now"
+        run: yarn audit --level moderate || echo "Audit failed with moderate issues, continuing anyway."

package.json

@@ -12,24 +12,31 @@
     "@mui/icons-material": "^5.14.3",
     "@mui/material": "^5.14.4",
     "@reduxjs/toolkit": "^1.9.5",
+    "@rjsf/core": "^5.24.8",
+    "@rjsf/mui": "^5.24.8",
+    "@rjsf/utils": "^5.24.8",
+    "@rjsf/validator-ajv8": "^5.24.8",
     "@testing-library/jest-dom": "^5.14.1",
     "@testing-library/react": "^13.0.0",
     "@testing-library/user-event": "^13.2.1",
     "@types/jest": "^27.0.1",
+    "@types/numjs": "^0.16.8",
     "@types/react": "^18.0.0",
     "@types/react-dom": "^18.0.0",
-    "@types/three": "^0.174.0",
+    "@types/three": "^0.176.0",
     "ajv": "^8",
     "ajv-keywords": "^5",
     "axios": "^1.4.0",
     "bda": "^1.0.0",
     "bjd": "^0.3.2",
-    "buffer": "^6.0.3",
+    "buffer": "6.0.3",
     "dayjs": "^1.11.10",
-    "jda": "^0.4.0",
     "jquery": "^3.7.1",
     "json-stringify-safe": "^5.0.1",
     "jwt-decode": "^3.1.2",
+    "lzma": "^2.3.2",
+    "numjs": "^0.16.1",
+    "pako": "1.0.11",
     "path-browserify": "^1.0.1",
     "query-string": "^8.1.0",
     "react": "^18.2.0",
@@ -38,16 +45,20 @@
     "react-redux": "^8.1.2",
     "react-router-dom": "^6.15.0",
     "react-scripts": "^5.0.1",
+    "react-syntax-highlighter": "^15.6.1",
     "sharp": "^0.33.5",
     "stats-js": "^1.0.1",
+    "stats.js": "0.17.0",
+    "three": "0.145.0",
     "typescript": "^5.1.6",
-    "uplot": "^1.6.31",
+    "uplot": "1.6.17",
     "web-vitals": "^2.1.0"
   },
   "devDependencies": {
     "@babel/plugin-proposal-private-property-in-object": "^7.21.11",
     "@trivago/prettier-plugin-sort-imports": "^4.2.0",
     "@types/node": "^20.5.7",
+    "@types/pako": "^2.0.3",
     "@typescript-eslint/eslint-plugin": "^5.31.0",
     "@typescript-eslint/parser": "^5.31.0",
     "eslint": "^8.21.0",
@@ -83,6 +94,6 @@
     "postcss": "^8.4.31",
     "nth-check": "^2.0.1",
     "@babel/runtime": "7.26.10",
-    "@babel/helpers": "7.26.10"
+    "3d-force-graph": "1.74.6"
   }
 }