[bug] put user site package numpy include before system numpy include

Author: fangq

README.md

@@ -5,7 +5,7 @@
 - Copyright: (C) Qianqian Fang (2020-2025) <q.fang at neu.edu>
 - Copyright: (C) Iotic Labs Ltd. (2016-2019) <vilnis.termanis at iotic-labs.com>
 - License: Apache License, Version 2.0
-- Version: 0.5.2
+- Version: 0.5.3
 - URL: https://pypi.org/project/bjdata/
 - Github: https://github.com/NeuroJSON/pybj
 - BJData Spec Version: [V1 Draft 3](https://neurojson.org/bjdata/draft3)

bjdata/__init__.py

@@ -14,7 +14,7 @@
 # limitations under the License.
 
 
-"""BJData (Draft 2) and UBJSON (Draft 12) implementation
+"""BJData (Draft 3) and UBJSON (Draft 12) implementation
 
 Example usage:
 
@@ -40,7 +40,7 @@
 from .encoder import EncoderException
 from .decoder import DecoderException
 
-__version__ = "0.5.2"
+__version__ = "0.5.3"
 
 __all__ = (
     "EXTENSION_ENABLED",

coverage_test.sh

@@ -11,9 +11,9 @@ rm -rf coverage/{c,python}
 
 # Coverage should be measured with extension compiled for both Python 2 & 3 (e.g. via separate venv)
 export CFLAGS="-coverage"
-python setup.py build_ext -i
-python -mcoverage run --branch --omit=bjdata/compat.py -m unittest discover test/ -vf
-python -mcoverage html -d coverage/python
+python3 setup.py build_ext -i
+python3 -mcoverage run --branch --omit=bjdata/compat.py -m unittest discover test/ -vf
+python3 -mcoverage html -d coverage/python
 lcov --capture --directory . --output-file /tmp/bjdata-coverage.info.pre
 # Only consider own source files. (Unfortunately extract/remove commands seem incapable of reading from stdin)
 lcov --extract /tmp/bjdata-coverage.info.pre "$(pwd)/src/*" --output-file /tmp/bjdata-coverage.info.pre2

setup.py

@@ -20,7 +20,8 @@
 import warnings
 from glob import glob
 from platform import python_implementation
-import numpy
+from site import getusersitepackages
+from numpy import get_include as numpy_get_include
 
 # Allow for environments without setuptools
 try:
@@ -43,6 +44,10 @@ def load_description(filename):
         return infile.read()
 
 
+user_site = getusersitepackages()
+user_numpy_include = os.path.join(user_site, "numpy", "core", "include")
+
+
 # Loosely based on https://github.com/mongodb/mongo-python-driver/blob/master/setup.py
 class BuildExtWarnOnFail(build_ext):
     """Allow for extension building to fail."""
@@ -73,14 +78,14 @@ def build_extension(self, ext):
     "PYBJDATA_NO_EXTENSION" not in os.environ and python_implementation() != "PyPy"
 )
 
-COMPILE_ARGS = ["-std=c99", "-DUSE__BJDATA"]
+COMPILE_ARGS = ["-std=c99", "-DUSE__BJDATA", "-v"]
 # For testing/debug only - some of these are GCC-specific
 # COMPILE_ARGS += ['-Wall', '-Wextra', '-Wundef', '-Wshadow', '-Wcast-align', '-Wcast-qual', '-Wstrict-prototypes',
 #                  '-pedantic']
 
 setup(
     name="bjdata",
-    version="0.5.2",
+    version="0.5.3",
     description="Binary JData and UBJSON encoder/decoder",
     long_description=load_description("README.md"),
     long_description_content_type="text/markdown",
@@ -99,7 +104,7 @@ def build_extension(self, ext):
             Extension(
                 "_bjdata",
                 sorted(glob("src/*.c")),
-                include_dirs=[numpy.get_include()],
+                include_dirs=[user_numpy_include, numpy_get_include()],
                 extra_compile_args=COMPILE_ARGS,
                 # undef_macros=['NDEBUG']
             )