Merge pull request #667 from ORNL-AMO/develop

AMO-Tools-Suite v1.0.1

Author: gaccawi

.gitignore

@@ -21,7 +21,6 @@ tags
 ### Eclipse template
 
 .metadata
-bin/
 tmp/
 *.tmp
 *.bak
@@ -126,7 +125,6 @@ CTestTestfile.cmake
 x64/
 x86/
 bld/
-[Bb]in/
 [Oo]bj/
 [Ll]og/
 

CMakeLists.txt

@@ -41,7 +41,8 @@ if(BUILD_WASM)
   set(BUILD_PACKAGE false)
   set(BUILD_TESTING false)
   set(CMAKE_CXX_STANDARD 11)
-  set(CMAKE_CXX_FLAGS "-fexceptions --bind -s WASM=1 -O3 -s ASSERTIONS=1 -std=c++11")
+  set(CMAKE_CXX_FLAGS "-fexceptions -O3 -std=c++11")
+  set(CMAKE_EXE_LINKER_FLAGS "--no-entry --bind -s WASM=1 -s ASSERTIONS=1 -s ERROR_ON_UNDEFINED_SYMBOLS=0")
 else ()
   include(cmake/CompilerFlags.cmake)
 endif ()
@@ -544,7 +545,7 @@ if( BUILD_TESTING )
     # Create unit testing executable
     add_executable(amo_tools_suite_tests tests/main.unit.cpp ${TEST_FILES})
     target_link_libraries( amo_tools_suite_tests Catch amo_tools_suite )
-else (BUILD_WASM)
+elseif ( BUILD_WASM )
     add_executable(client ${SOURCE_FILES} ${SOURCE_FILES_WASM})
 endif()
 
@@ -571,4 +572,4 @@ if( BUILD_PACKAGE )
   )
 
   include(cmake/Install.cmake)
-endif()
+endif()

Doxyfile

@@ -38,7 +38,7 @@ PROJECT_NAME           = AMO-Tools-Suite
 # could be handy for archiving the generated documentation or if some version
 # control system is used.
 
-PROJECT_NUMBER         = v.0.1.34
+PROJECT_NUMBER = v.1.0.1
 
 # Using the PROJECT_BRIEF tag one can provide an optional one line description
 # for a project that appears at the top of each page and should give viewer a
@@ -791,7 +791,7 @@ WARN_LOGFILE           =
 # spaces. See also FILE_PATTERNS and EXTENSION_MAPPING
 # Note: If this tag is empty the current directory is searched.
 
-INPUT                  = /Users/g9a/ClionProjects/AMO-Tools-Suite
+INPUT = include
 
 # This tag can be used to specify the character encoding of the source files
 # that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses