Skip to content

Commit c8e5954

Browse files
zhengj2007zhengj2007
committed
import 'social act' and 'planned process'
1 parent c1b5f3f commit c8e5954

File tree

5 files changed

+82
-0
lines changed

5 files changed

+82
-0
lines changed

‎src/ontology/Ontofox_input/OBI_import_input.txt‎

Lines changed: 3 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -6,10 +6,13 @@ OBI
66

77
[Low level source term URIs]
88
http://purl.obolibrary.org/obo/OBI_0000245 #organization
9+
http://purl.obolibrary.org/obo/OBI_0000011 #planned process
910

1011
[Top level source term URIs and target direct superclass URIs]
1112
http://purl.obolibrary.org/obo/OBI_0000245 #organization
1213
subClassOf http://purl.obolibrary.org/obo/BFO_0000040 #material entity
14+
http://purl.obolibrary.org/obo/OBI_0000011 #planned process
15+
subClassOf http://purl.obolibrary.org/obo/BFO_0000015
1316

1417
[Source term retrieval setting]
1518
includeNoIntermediates

‎src/ontology/catalog-v001.xml‎

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -4,6 +4,7 @@
44
<uri name="http://purl.obolibrary.org/obo/occo/IAO_imports.owl" uri="imports/IAO_imports.owl"/>
55
<uri name="http://purl.obolibrary.org/obo/occo/OBI_imports.owl" uri="imports/OBI_imports.owl"/>
66
<uri name="http://purl.obolibrary.org/obo/occo/OMRSE_imports.owl" uri="imports/OMRSE_imports.owl"/>
7+
<uri name="http://purl.obolibrary.org/obo/occo/externalByHand.owl" uri="imports/externalByHand.owl"/>
78
<uri name="http://purl.obolibrary.org/obo/occo/dev/ability_types.owl" uri="Modules/ability_types.owl"/>
89
<uri name="http://purl.obolibrary.org/obo/occo/dev/job_zones.owl" uri="Modules/job_zones.owl"/>
910
<uri name="http://purl.obolibrary.org/obo/occo/dev/job_zones_equivalent.owl" uri="Modules/job_zones_equivalent.owl"/>

‎src/ontology/imports/OBI_imports.owl‎

Lines changed: 34 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -64,6 +64,12 @@
6464

6565

6666

67+
<!-- http://purl.obolibrary.org/obo/IAO_0000232 -->
68+
69+
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000232"/>
70+
71+
72+
6773
<!-- http://purl.obolibrary.org/obo/IAO_0000412 -->
6874

6975
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000412"/>
@@ -81,12 +87,40 @@
8187

8288

8389

90+
<!-- http://purl.obolibrary.org/obo/BFO_0000015 -->
91+
92+
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>
93+
94+
95+
8496
<!-- http://purl.obolibrary.org/obo/BFO_0000040 -->
8597

8698
<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
8799

88100

89101

102+
<!-- http://purl.obolibrary.org/obo/OBI_0000011 -->
103+
104+
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000011">
105+
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
106+
<obo:IAO_0000111>planned process</obo:IAO_0000111>
107+
<obo:IAO_0000111 xml:lang="en">planned process</obo:IAO_0000111>
108+
<obo:IAO_0000112>Injecting mice with a vaccine in order to test its efficacy</obo:IAO_0000112>
109+
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
110+
<obo:IAO_0000115 xml:lang="en">A process that realizes a plan which is the concretization of a plan specification.</obo:IAO_0000115>
111+
<obo:IAO_0000116>&apos;Plan&apos; includes a future direction sense. That can be problematic if plans are changed during their execution. There are however implicit contingencies for protocols that an agent has in his mind that can be considered part of the plan, even if the agent didn&apos;t have them in mind before. Therefore, a planned process can diverge from what the agent would have said the plan was before executing it, by adjusting to problems encountered during execution (e.g. choosing another reagent with equivalent properties, if the originally planned one has run out.)</obo:IAO_0000116>
112+
<obo:IAO_0000116>We are only considering successfully completed planned processes. A plan may be modified, and details added during execution. For a given planned process, the associated realized plan specification is the one encompassing all changes made during execution. This means that all processes in which an agent acts towards achieving some
113+
objectives is a planned process.</obo:IAO_0000116>
114+
<obo:IAO_0000117>Bjoern Peters</obo:IAO_0000117>
115+
<obo:IAO_0000119>branch derived</obo:IAO_0000119>
116+
<obo:IAO_0000232>6/11/9: Edited at workshop. Used to include: is initiated by an agent</obo:IAO_0000232>
117+
<obo:IAO_0000232 xml:lang="en">This class merges the previously separated objective driven process and planned process, as they the separation proved hard to maintain. (1/22/09, branch call)</obo:IAO_0000232>
118+
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/obi.owl"/>
119+
<rdfs:label xml:lang="en">planned process</rdfs:label>
120+
</owl:Class>
121+
122+
123+
90124
<!-- http://purl.obolibrary.org/obo/OBI_0000245 -->
91125

92126
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000245">

‎src/ontology/imports/externalByHand.owl‎

Lines changed: 43 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,43 @@
1+
<?xml version="1.0"?>
2+
<rdf:RDF xmlns="http://purl.obolibrary.org/obo/occo/externalByHand.owl#"
3+
xml:base="http://purl.obolibrary.org/obo/occo/externalByHand.owl"
4+
xmlns:obo="http://purl.obolibrary.org/obo/"
5+
xmlns:owl="http://www.w3.org/2002/07/owl#"
6+
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
7+
xmlns:xml="http://www.w3.org/XML/1998/namespace"
8+
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
9+
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
10+
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/occo/externalByHand.owl"/>
11+
12+
13+
14+
<!--
15+
///////////////////////////////////////////////////////////////////////////////////////
16+
//
17+
// Classes
18+
//
19+
///////////////////////////////////////////////////////////////////////////////////////
20+
-->
21+
22+
23+
24+
25+
<!-- http://purl.obolibrary.org/obo/IAO_0021003 -->
26+
27+
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0021003">
28+
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000011"/>
29+
<obo:IAO_0000112 xml:lang="en">Colonel Klink giving Sergeant Schultz an order, Jake promising Jill to take her to the junior prom</obo:IAO_0000112>
30+
<obo:IAO_0000115 xml:lang="en">A planned process that is carried out by a conscious being or an organization, and is self-generated, directed towards another conscious being or an aggregate of conscious beings, an organization or an aggregate of organizations, and that is in need of being perceived.</obo:IAO_0000115>
31+
<obo:IAO_0000117>Mathias Brochhausen</obo:IAO_0000117>
32+
<rdfs:comment xml:lang="en">The phrase &quot;in need of being perceived&quot; does not imply that only planned processes that are in fact perceived can be social acts. Reinach clarifies that by exemplifying these matters for commands: &quot;The command is according to its essence in need of being heard (vernehmungsbedürtig&quot;. It can of course happen that commands are given without being heard. Then they fail to fulfil their purpose. They are like thrown spears which fall to the ground without hitting their target.&quot; (A. Reinach: The Apriori Foundations of the Civil Law.&quot; Edited by J. Crosby, Heusenstamm: ontos Verlag, 2012).
33+
Reinach clearly does not imply that a command that does not fulfill its prupose would not be a command.
34+
Thanks to W.R. Hogan for finding the Reinach quote.</rdfs:comment>
35+
<rdfs:label xml:lang="en">social act</rdfs:label>
36+
<obo:IAO_0000412 rdf:resource="http://purl.obolibrary.org/obo/iao/d-acts.owl"/>
37+
</owl:Class>
38+
</rdf:RDF>
39+
40+
41+
42+
<!-- Generated by the OWL API (version 3.3.1957) http://owlapi.sourceforge.net -->
43+

‎src/ontology/occo-edit.owl‎

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -20,6 +20,7 @@
2020
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/occo/NCBITaxon_imports.owl"/>
2121
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/occo/OBI_imports.owl"/>
2222
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/occo/OMRSE_imports.owl"/>
23+
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/occo/externalByHand.owl"/>
2324
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/occo/dev/Alabama_subset.owl"/>
2425
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/occo/dev/US_SOC_ID.owl"/>
2526
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/occo/dev/ability_types.owl"/>

0 commit comments

Comments
 (0)