fix VCF indel position issue

Author: sfchen

src/mutation.cpp

@@ -252,7 +252,7 @@ vector<Mutation> Mutation::parseVcf(string vcfFile, string refFile) {
             ss<<cds<<"_";
         ss<<chrom<<"_"<<v.pos<<"_"<<v.ref<<">"<<v.alt;
         string name = ss.str();
-        string left = ref[chrom].substr(v.pos-25-v.ref.length(), 25);
+        string left = ref[chrom].substr(v.pos-25-1, 25);
         str2upper(left);
         string center = v.alt;
         string right = ref[chrom].substr(v.pos+v.ref.length()-1, 25);