Merge pull request #23 from OpenProteinAI/test

added conda

Author: Michael-Bar

.github/workflows/s3.yaml

@@ -5,12 +5,31 @@ on:
     branches:
     - develop
     - prod
+    - test
 
 jobs:
   build_and_sync:
     runs-on: ubuntu-latest
     steps:
     - uses: actions/checkout@v1
+  
+    - name: Install Poetry
+      run: |
+        curl -sSL https://install.python-poetry.org | python -
+
+    - name: Create and push tag if on prod branch
+      if: github.ref == 'refs/heads/prod'
+      run: |
+        VERSION=$(poetry version -s)
+        git tag $VERSION
+        git push origin $VERSION
+
+    - name: Create and push test tag if on test branch
+      if: github.ref == 'refs/heads/test'
+      run: |
+        VERSION=$(poetry version -s)
+        git tag testvers
+        git push origin testvers
 
     - name: Install Pandoc
       run: |
@@ -25,7 +44,7 @@ jobs:
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
-        pip install sphinx recommonmark sphinx_markdown_tables sphinx_markdown_builder nbsphinx sphinx-rtd-theme pandas requests tqdm pydantic coverage coverage-badge
+        pip install pytest sphinx recommonmark sphinx_markdown_tables sphinx_markdown_builder nbsphinx sphinx-rtd-theme pandas requests tqdm pydantic coverage coverage-badge
 
     - name: Run tests and generate coverage badge
       run: |
@@ -48,6 +67,8 @@ jobs:
         then bucket=openprotein-docs-dev; \
         elif [ $branch == 'prod' ]; \
         then bucket=openprotein-docs-prod; \
+        elif [ $branch == 'test' ]; \
+        then bucket=openprotein-docs-dev; \
         else exit 1; fi; \
         echo $bucket; \
         echo "bucket=$bucket" >> $GITHUB_OUTPUT
@@ -61,6 +82,8 @@ jobs:
         then dist=E3SMW2DYY71HHW; \
         elif [ $branch == 'prod' ]; \
         then dist=E1CUT1CP31D5NK; \
+        elif [ $branch == 'test' ]; \
+        then dist=E3SMW2DYY71HHW; \
         else exit 1; fi; \
         echo $dist; \
         echo "dist=$dist" >> $GITHUB_OUTPUT

README.md

@@ -1,5 +1,8 @@
 [![PyPI version](https://badge.fury.io/py/openprotein-python.svg)](https://pypi.org/project/openprotein-python/)
 [![Coverage](https://dev.docs.openprotein.ai/api-python/_images/coverage.svg)](https://pypi.org/project/openprotein-python/)
+[![Conda version](https://anaconda.org/openprotein/openprotein_python/badges/version.svg)](https://anaconda.org/openprotein/openprotein_python)
+
+
 # openprotein-python
 The OpenProtein.AI Python Interface provides a user-friendly library to interact with the OpenProtein.AI REST API, enabling various tasks related to protein analysis and modeling.
 
@@ -9,6 +12,11 @@ To install the python interface using pip, run the following command:
 ```
 pip install openprotein-python
 ```
+
+or with conda:
+```
+conda install -c openprotein openprotein_python
+```
 ## Requirements
 
 - Python 3.7 or higher.

apidocs/build/doctrees/environment.pickle

@@ -43,6 +43,7 @@
         </div><div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="Navigation menu">
               <p class="caption" role="heading"><span class="caption-text">Contents:</span></p>
 <ul>
+<li class="toctree-l1"><a class="reference internal" href="../installation.html">Installation</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../overview.html">Session management</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../core_workflow.html">Asssay-based Sequence Learning</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../poet_workflow.html">De Novo prediction &amp; generative models (PoET)</a></li>

apidocs/build/doctrees/index.doctree

@@ -43,6 +43,7 @@
         </div><div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="Navigation menu">
               <p class="caption" role="heading"><span class="caption-text">Contents:</span></p>
 <ul>
+<li class="toctree-l1"><a class="reference internal" href="../installation.html">Installation</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../overview.html">Session management</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../core_workflow.html">Asssay-based Sequence Learning</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../poet_workflow.html">De Novo prediction &amp; generative models (PoET)</a></li>

apidocs/build/doctrees/installation.doctree

@@ -43,6 +43,7 @@
         </div><div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="Navigation menu">
               <p class="caption" role="heading"><span class="caption-text">Contents:</span></p>
 <ul>
+<li class="toctree-l1"><a class="reference internal" href="../../../installation.html">Installation</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../../../overview.html">Session management</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../../../core_workflow.html">Asssay-based Sequence Learning</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../../../poet_workflow.html">De Novo prediction &amp; generative models (PoET)</a></li>

apidocs/build/html/_modules/index.html

@@ -43,6 +43,7 @@
         </div><div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="Navigation menu">
               <p class="caption" role="heading"><span class="caption-text">Contents:</span></p>
 <ul>
+<li class="toctree-l1"><a class="reference internal" href="../../../installation.html">Installation</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../../../overview.html">Session management</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../../../core_workflow.html">Asssay-based Sequence Learning</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../../../poet_workflow.html">De Novo prediction &amp; generative models (PoET)</a></li>

apidocs/build/html/_modules/openprotein.html

@@ -43,6 +43,7 @@
         </div><div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="Navigation menu">
               <p class="caption" role="heading"><span class="caption-text">Contents:</span></p>
 <ul>
+<li class="toctree-l1"><a class="reference internal" href="../../../installation.html">Installation</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../../../overview.html">Session management</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../../../core_workflow.html">Asssay-based Sequence Learning</a></li>
 <li class="toctree-l1"><a class="reference internal" href="../../../poet_workflow.html">De Novo prediction &amp; generative models (PoET)</a></li>