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Regenerated nml files
1 parent 8cf70a6 commit 1debebd

20 files changed

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-14187
lines changed

‎NMC/NeuroML2/LEMS_L1_HAC_cNAC187_1.xml‎

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<!--
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This LEMS file has been automatically generated using PyNeuroML v0.3.16 (libNeuroML v0.2.47)
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This LEMS file has been automatically generated using PyNeuroML v0.7.2 (libNeuroML v0.4.1)
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-->
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<Include file="pas.channel.nml"/>
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<Include file="Im.channel.nml"/>
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<Include file="NaTa_t.channel.nml"/>
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<Include file="Ca_LVAst.channel.nml"/>
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<Include file="SK_E2.channel.nml"/>
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<Include file="K_Pst.channel.nml"/>
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<Include file="CaDynamics_E2_NML2.nml"/>
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<Include file="Ca_LVAst.channel.nml"/>
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<Include file="Ca.channel.nml"/>
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<Simulation id="L1_HAC_cNAC187_1" length="3000ms" step="0.025ms" target="network" seed="1234"> <!-- Note seed: ensures same random numbers used every run -->
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<Display id="DispPop__Pop_cNAC187_L1_HAC_f8c9772d9d_0_0" title="Membrane potentials of cells in Pop_cNAC187_L1_HAC_f8c9772d9d_0_0" timeScale="1ms" xmin="-300.0" xmax="3300.0" ymin="-90" ymax="50">
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<Line id="Pop_cNAC187_L1_HAC_f8c9772d9d_0_0[0]: v" quantity="Pop_cNAC187_L1_HAC_f8c9772d9d_0_0/0/cNAC187_L1_HAC_f8c9772d9d_0_0/v" scale="1mV" color="#6aa799" timeScale="1ms"/>
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<Display id="DispPop__Pop_cNAC187_L1_HAC_f8c9772d9d_0_0" title="Membrane potentials of cells in Pop_cNAC187_L1_HAC_f8c9772d9d_0_0" timeScale="1ms" xmin="-300.0" xmax="3300.0000000000005" ymin="-90" ymax="50">
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<Line id="Pop_cNAC187_L1_HAC_f8c9772d9d_0_0[0]: v" quantity="Pop_cNAC187_L1_HAC_f8c9772d9d_0_0/0/cNAC187_L1_HAC_f8c9772d9d_0_0/v" scale="1mV" color="#d54f33" timeScale="1ms"/>
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</Display>
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<OutputFile id="Volts_file__Pop_cNAC187_L1_HAC_f8c9772d9d_0_0" fileName="L1_HAC_cNAC187_1.Pop_cNAC187_L1_HAC_f8c9772d9d_0_0.v.dat">

‎NMC/NeuroML2/LEMS_L23_LBC_cSTUT189_1.xml‎

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<!--
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This LEMS file has been automatically generated using PyNeuroML v0.3.16 (libNeuroML v0.2.47)
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This LEMS file has been automatically generated using PyNeuroML v0.7.2 (libNeuroML v0.4.1)
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-->
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<Include file="cSTUT189_L23_LBC_e6e8f83407.stepcurrent3.net.nml"/>
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<Include file="cSTUT189_L23_LBC_e6e8f83407_0_0.cell.nml"/>
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<Include file="K_Tst.channel.nml"/>
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<Include file="SKv3_1.channel.nml"/>
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<Include file="StochKv_deterministic.channel.nml"/>
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<Include file="Nap_Et2.channel.nml"/>
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<Include file="NaTs2_t.channel.nml"/>
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<Include file="Ih.channel.nml"/>
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<Include file="NaTs2_t.channel.nml"/>
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<Include file="SKv3_1.channel.nml"/>
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<Include file="pas.channel.nml"/>
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<Include file="Im.channel.nml"/>
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<Include file="NaTa_t.channel.nml"/>
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<Include file="Ca_LVAst.channel.nml"/>
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<Include file="SK_E2.channel.nml"/>
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<Include file="K_Pst.channel.nml"/>
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<Include file="CaDynamics_E2_NML2.nml"/>
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<Include file="Ca_LVAst.channel.nml"/>
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<Include file="Ca.channel.nml"/>
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<Simulation id="L23_LBC_cSTUT189_1" length="3000ms" step="0.025ms" target="network" seed="1234"> <!-- Note seed: ensures same random numbers used every run -->
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<Display id="DispPop__Pop_cSTUT189_L23_LBC_e6e8f83407_0_0" title="Membrane potentials of cells in Pop_cSTUT189_L23_LBC_e6e8f83407_0_0" timeScale="1ms" xmin="-300.0" xmax="3300.0" ymin="-90" ymax="50">
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<Line id="Pop_cSTUT189_L23_LBC_e6e8f83407_0_0[0]: v" quantity="Pop_cSTUT189_L23_LBC_e6e8f83407_0_0/0/cSTUT189_L23_LBC_e6e8f83407_0_0/v" scale="1mV" color="#6aa799" timeScale="1ms"/>
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<Display id="DispPop__Pop_cSTUT189_L23_LBC_e6e8f83407_0_0" title="Membrane potentials of cells in Pop_cSTUT189_L23_LBC_e6e8f83407_0_0" timeScale="1ms" xmin="-300.0" xmax="3300.0000000000005" ymin="-90" ymax="50">
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<Line id="Pop_cSTUT189_L23_LBC_e6e8f83407_0_0[0]: v" quantity="Pop_cSTUT189_L23_LBC_e6e8f83407_0_0/0/cSTUT189_L23_LBC_e6e8f83407_0_0/v" scale="1mV" color="#d54f33" timeScale="1ms"/>
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</Display>
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<OutputFile id="Volts_file__Pop_cSTUT189_L23_LBC_e6e8f83407_0_0" fileName="L23_LBC_cSTUT189_1.Pop_cSTUT189_L23_LBC_e6e8f83407_0_0.v.dat">

‎NMC/NeuroML2/LEMS_L23_NBC_cNAC187_1.xml‎

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<!--
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This LEMS file has been automatically generated using PyNeuroML v0.3.16 (libNeuroML v0.2.47)
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This LEMS file has been automatically generated using PyNeuroML v0.7.2 (libNeuroML v0.4.1)
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-->
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<Include file="pas.channel.nml"/>
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<Include file="Im.channel.nml"/>
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<Include file="NaTa_t.channel.nml"/>
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<Include file="Ca_LVAst.channel.nml"/>
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<Include file="SK_E2.channel.nml"/>
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<Include file="K_Pst.channel.nml"/>
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<Include file="CaDynamics_E2_NML2.nml"/>
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<Include file="Ca_LVAst.channel.nml"/>
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<Include file="Ca.channel.nml"/>
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<Simulation id="L23_NBC_cNAC187_1" length="3000ms" step="0.025ms" target="network" seed="1234"> <!-- Note seed: ensures same random numbers used every run -->
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<Display id="DispPop__Pop_cNAC187_L23_NBC_9d37c4b1f8_0_0" title="Membrane potentials of cells in Pop_cNAC187_L23_NBC_9d37c4b1f8_0_0" timeScale="1ms" xmin="-300.0" xmax="3300.0" ymin="-90" ymax="50">
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<Line id="Pop_cNAC187_L23_NBC_9d37c4b1f8_0_0[0]: v" quantity="Pop_cNAC187_L23_NBC_9d37c4b1f8_0_0/0/cNAC187_L23_NBC_9d37c4b1f8_0_0/v" scale="1mV" color="#6aa799" timeScale="1ms"/>
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<Display id="DispPop__Pop_cNAC187_L23_NBC_9d37c4b1f8_0_0" title="Membrane potentials of cells in Pop_cNAC187_L23_NBC_9d37c4b1f8_0_0" timeScale="1ms" xmin="-300.0" xmax="3300.0000000000005" ymin="-90" ymax="50">
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<Line id="Pop_cNAC187_L23_NBC_9d37c4b1f8_0_0[0]: v" quantity="Pop_cNAC187_L23_NBC_9d37c4b1f8_0_0/0/cNAC187_L23_NBC_9d37c4b1f8_0_0/v" scale="1mV" color="#d54f33" timeScale="1ms"/>
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</Display>
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<OutputFile id="Volts_file__Pop_cNAC187_L23_NBC_9d37c4b1f8_0_0" fileName="L23_NBC_cNAC187_1.Pop_cNAC187_L23_NBC_9d37c4b1f8_0_0.v.dat">

‎NMC/NeuroML2/LEMS_L23_PC_cADpyr229_1.xml‎

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<!--
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This LEMS file has been automatically generated using PyNeuroML v0.3.16 (libNeuroML v0.2.47)
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This LEMS file has been automatically generated using PyNeuroML v0.7.2 (libNeuroML v0.4.1)
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-->
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<Simulation id="L23_PC_cADpyr229_1" length="3000ms" step="0.025ms" target="network" seed="1234"> <!-- Note seed: ensures same random numbers used every run -->
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<Display id="DispPop__Pop_cADpyr229_L23_PC_5ecbf9b163_0_0" title="Membrane potentials of cells in Pop_cADpyr229_L23_PC_5ecbf9b163_0_0" timeScale="1ms" xmin="-300.0" xmax="3300.0" ymin="-90" ymax="50">
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<Line id="Pop_cADpyr229_L23_PC_5ecbf9b163_0_0[0]: v" quantity="Pop_cADpyr229_L23_PC_5ecbf9b163_0_0/0/cADpyr229_L23_PC_5ecbf9b163_0_0/v" scale="1mV" color="#6aa799" timeScale="1ms"/>
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<Display id="DispPop__Pop_cADpyr229_L23_PC_5ecbf9b163_0_0" title="Membrane potentials of cells in Pop_cADpyr229_L23_PC_5ecbf9b163_0_0" timeScale="1ms" xmin="-300.0" xmax="3300.0000000000005" ymin="-90" ymax="50">
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<Line id="Pop_cADpyr229_L23_PC_5ecbf9b163_0_0[0]: v" quantity="Pop_cADpyr229_L23_PC_5ecbf9b163_0_0/0/cADpyr229_L23_PC_5ecbf9b163_0_0/v" scale="1mV" color="#d54f33" timeScale="1ms"/>
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</Display>
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<OutputFile id="Volts_file__Pop_cADpyr229_L23_PC_5ecbf9b163_0_0" fileName="L23_PC_cADpyr229_1.Pop_cADpyr229_L23_PC_5ecbf9b163_0_0.v.dat">

‎NMC/NeuroML2/LEMS_L5_TTPC1_cADpyr232_1.xml‎

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<!--
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This LEMS file has been automatically generated using PyNeuroML v0.3.16 (libNeuroML v0.2.47)
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This LEMS file has been automatically generated using PyNeuroML v0.7.2 (libNeuroML v0.4.1)
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-->
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<Simulation id="L5_TTPC1_cADpyr232_1" length="3000ms" step="0.025ms" target="network" seed="1234"> <!-- Note seed: ensures same random numbers used every run -->
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<Display id="DispPop__Pop_cADpyr232_L5_TTPC1_0fb1ca4724_0_0" title="Membrane potentials of cells in Pop_cADpyr232_L5_TTPC1_0fb1ca4724_0_0" timeScale="1ms" xmin="-300.0" xmax="3300.0" ymin="-90" ymax="50">
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<Line id="Pop_cADpyr232_L5_TTPC1_0fb1ca4724_0_0[0]: v" quantity="Pop_cADpyr232_L5_TTPC1_0fb1ca4724_0_0/0/cADpyr232_L5_TTPC1_0fb1ca4724_0_0/v" scale="1mV" color="#6aa799" timeScale="1ms"/>
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<Display id="DispPop__Pop_cADpyr232_L5_TTPC1_0fb1ca4724_0_0" title="Membrane potentials of cells in Pop_cADpyr232_L5_TTPC1_0fb1ca4724_0_0" timeScale="1ms" xmin="-300.0" xmax="3300.0000000000005" ymin="-90" ymax="50">
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<Line id="Pop_cADpyr232_L5_TTPC1_0fb1ca4724_0_0[0]: v" quantity="Pop_cADpyr232_L5_TTPC1_0fb1ca4724_0_0/0/cADpyr232_L5_TTPC1_0fb1ca4724_0_0/v" scale="1mV" color="#d54f33" timeScale="1ms"/>
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</Display>
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<OutputFile id="Volts_file__Pop_cADpyr232_L5_TTPC1_0fb1ca4724_0_0" fileName="L5_TTPC1_cADpyr232_1.Pop_cADpyr232_L5_TTPC1_0fb1ca4724_0_0.v.dat">

‎NMC/NeuroML2/cADpyr229_L23_PC_5ecbf9b163.net.nml‎

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xsi:schemaLocation="http://www.neuroml.org/schema/neuroml2 https://raw.github.com/NeuroML/NeuroML2/development/Schemas/NeuroML2/NeuroML_v2beta4.xsd"
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id = "NeuroML2_file_exported_from_NEURON">
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<notes> NeuroML 2 file generated from ModelView by: NEURON -- VERSION 7.5 master (6b4c19f) 2017-09-25
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<notes> NeuroML 2 file generated from ModelView by: NEURON -- VERSION 7.8.2 HEAD (09b151ec) 2020-12-16
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Authors: Michael Hines, Sushil Kambampati and Padraig Gleeson,
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Yale University and UCL
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</notes>

‎NMC/NeuroML2/cADpyr229_L23_PC_5ecbf9b163.stepcurrent3.net.nml‎

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<neuroml xmlns="http://www.neuroml.org/schema/neuroml2" xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.neuroml.org/schema/neuroml2 https://raw.github.com/NeuroML/NeuroML2/development/Schemas/NeuroML2/NeuroML_v2beta5.xsd" id="NeuroML2_file_exported_from_NEURON">
1+
<neuroml xmlns="http://www.neuroml.org/schema/neuroml2" xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.neuroml.org/schema/neuroml2 https://raw.github.com/NeuroML/NeuroML2/development/Schemas/NeuroML2/NeuroML_v2.3.xsd" id="NeuroML2_file_exported_from_NEURON">
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<notes>
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Export of a cell model obtained from the BBP NeocorticalMicrocircuit Collaboration Portal into NeuroML2

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