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NeuroML2/osbSessions/1.html

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<p>The parameters of the model (channel conductance densities and passive properties like specific capacitance, axial resistance) were tuned to match electrophysiological recordings from an identified L2/3
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(<a href="https://bbp.epfl.ch/nmc-portal/glossary">continuous, accommodating</a>) pyramidal cell.</p>
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(<a href="https://bbp.epfl.ch/nmc-portal/glossary">continuously firing, accommodating, slightly adapting</a>) pyramidal cell.</p>
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<p>More details on the original model can be found on the <a href="https://bbp.epfl.ch/nmc-portal/microcircuit" target="_blank">BBP Neocortical Microcircuit portal</a> website.</p>
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<p>More details on the original model can be found on the <a href="https://bbp.epfl.ch/nmc-portal/microcircuit#/metype/L23_PC_cADpyr/details" target="_blank">BBP Neocortical Microcircuit portal</a> website.</p>
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</div>

NeuroML2/osbSessions/10.html

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<p><strong>&nbsp;> The action potential initiates in the axon</strong> <br/>
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<i class="fa fa-exclamation-circle" aria-hidden="true" style="color:#dd0000"></i> Zoom in on the first spike,
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as shown below
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(left click on the plot and select the area around the spike). The orange trace for the axon clearly peaks before the blue of the soma (colors may differ in your plot).
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(left click on the plot and select the area around the spike). The orange trace for the axon clearly peaks before the blue of the soma (note: colors may differ in your plot).
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</p>
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<p><img src="https://raw.githubusercontent.com/OpenSourceBrain/L23PyramidalCellTutorial/master/NeuroML2/osbSessions/FirstSpike.png" alt="missing..." width="200"/></p>
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<p><img src="https://raw.githubusercontent.com/OpenSourceBrain/L23PyramidalCellTutorial/master/NeuroML2/osbSessions/FirstSpike.png" alt="missing..." width="380"/></p>
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<p><strong>&nbsp;> The action potential at the axon is narrow</strong> <br/>
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The high concentration of fast Na<sup>+</sup> channels (leading to strong depolarization) and rapidly activating K<sup>+</sup> channels

NeuroML2/osbSessions/3.html

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<p>&nbsp;> <strong><span style="color:#0066FF">soma</span></strong> - consisting of a set of flat segments recreating the shape of the pyramidal cell soma</strong><br/>
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&nbsp;> <strong><span style="color:#99CC00">dendrites</span></strong> - the basal and apical dendrites</strong><br/>
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&nbsp;> <strong><span style="color:#FF6600">axon</span></strong> - the short axon which has been added to the model in place of the reconstructed axon.
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The cell may need to be rotated to see this.</strong></p>
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You may need to rotate/zoom in on the cell to see this (use the mouse or the <i class="fa fa-search-plus" aria-hidden="true" style="color:#ff5a02"></i>,
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<i class="fa fa-repeat" aria-hidden="true" style="color:#ff5a02"></i>, etc. buttons on the left).</strong></p>
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</div>

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