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DESCRIPTION

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Package: barbieQ
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Type: Package
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Title: Analyze Barcode Data from Clonal Tracking Experiments
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Version: 0.99.0
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Version: 0.99.1
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Description: The barbieQ package provides a series of robust statistical tools
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for analysing barcode count data generated from cell clonal tracking (i.e., lineage tracing) experiments.
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In these experiments, an initial cell and its offspring collectively form a clone (i.e., lineage).

NAMESPACE

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# Generated by roxygen2: do not edit by hand
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export(clusterCorrelatingBarcodes)
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export(collapseBarcodes)
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export(collapseSamples)
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export(combineBarbieQs)
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export(createBarbieQ)
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export(plotBarcodeHeatmap)
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export(plotBarcodeMA)
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export(plotSamplePairCorrelation)
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export(plotSignifBarcodeHeatmap)
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export(plotSignifBarcodeProportion)
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export(subsetBarcodes)
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export(subsetSamples)
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export(subsetSamplesByMetadata)
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export(tagTopBarcodes)
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export(testBarcodeSignif)
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import(ComplexHeatmap)
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importFrom(dplyr,across)
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importFrom(dplyr,all_of)
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importFrom(dplyr,arrange)
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importFrom(dplyr,bind_cols)
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importFrom(dplyr,case_when)
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importFrom(dplyr,filter)
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importFrom(dplyr,group_by)

man/clusterCorrelatingBarcodes.Rd

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man/collapseBarcodes.Rd

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man/collapseSamples.Rd

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man/combineBarbieQs.Rd

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man/monkeyHSPC.Rd

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man/plotBarcodeMA.Rd

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man/plotBarcodePValue.Rd

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man/plotBarcodePairCorrelation.Rd

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