Add various timing checkpoints. The standalone executable doesn't work properly with an explicitly speficied cavity

Author: Roberto Di Remigio

src/bin/CMakeLists.txt

@@ -1,24 +1,9 @@
-# Executables for testing separate from Boost unit test framework or for profiling purposes
+# Executables for testing separate from the unit test framework or for profiling purposes
 # The executables will be created in ${PROJECT_BINARY_DIR}/src/bin
 
 #add_executable(debug_wavcav debug_wavcav.cpp)
 #target_link_libraries(debug_wavcav solver cavity wavcav pwl wem utils)
 
-#add_executable(plot_green_spherical plot_green_spherical.cpp)
-#target_link_libraries(plot_green_spherical utils ${external_libraries})
-
-#add_executable(plot_green_spherical-CASE1 plot_green_spherical-CASE1.cpp)
-#target_link_libraries(plot_green_spherical-CASE1 utils ${external_libraries})
-#add_executable(plot_green_spherical-CASE2 plot_green_spherical-CASE2.cpp)
-#target_link_libraries(plot_green_spherical-CASE2 utils ${external_libraries})
-#add_executable(plot_green_spherical-CASE3 plot_green_spherical-CASE3.cpp)
-#target_link_libraries(plot_green_spherical-CASE3 utils ${external_libraries})
-#add_executable(plot_green_spherical-CASE4 plot_green_spherical-CASE4.cpp)
-#target_link_libraries(plot_green_spherical-CASE4 utils ${external_libraries})
-
-#add_executable(check_Coulomb_coefficient check_Coulomb_coefficient.cpp)
-#target_link_libraries(check_Coulomb_coefficient utils ${external_libraries})
-
 link_directories(${PROJECT_BINARY_DIR}/lib)
 add_executable(run_pcm run_pcm.cpp)
 add_dependencies(run_pcm generate-config-hpp)