Get Python 3.13 Windows working by allowing new NumPy

Author: ciaranra

Makefile

@@ -1,15 +1,15 @@
 .DEFAULT_GOAL := help
 
 # Try to autodetect if python3 or python is the python executable used.
-PYTHONPATH := $(shell which python3 2>/dev/null || which python 2>/dev/null)
+PYTHONPATH := $(shell which python 2>/dev/null || which python3 2>/dev/null)
 
 SHELL=bash
 
 # Get absolute path of venv directory
 BASE_DIR := $(shell realpath .)
 VENV=$(BASE_DIR)/.venv
 ifeq ($(OS),Windows_NT)
-    VENV_BIN := $(VENV)/Scriptsexit
+    VENV_BIN := $(VENV)/Scripts
 else
     VENV_BIN := $(VENV)/bin
 endif

python/quantum-pecos/pyproject.toml

@@ -30,7 +30,7 @@ keywords = ["quantum", "QEC", "simulation", "PECOS"]
 dependencies = [
     "pecos-rslib==0.6.0.dev6",
     "phir>=0.3.3",
-    "numpy>=1.15.0,<2.0",
+    "numpy>=1.15.0",
     "scipy>=1.1.0",
     "networkx>=2.1.0",
     "matplotlib>=2.2.0",

python/quantum-pecos/requirements.txt

@@ -6,6 +6,7 @@
 #
 annotated-types==0.7.0
 attrs==24.2.0
+colorama==0.4.6
 contourpy==1.3.1
 cycler==0.12.1
 fonttools==4.55.2
@@ -16,7 +17,7 @@ markdown-it-py==3.0.0
 matplotlib==3.9.3
 mdurl==0.1.2
 networkx==3.4.2
-numpy==1.26.4
+numpy==2.1.3
 packaging==24.2
 phir==0.3.3
 pillow==11.0.0

python/quantum-pecos/src/pecos/classical_interpreters/phir_classical_interpreter.py

@@ -284,8 +284,10 @@ def assign_int(self, cvar, val: int):
         if i is None:
             cval = val
         else:
-            cval &= ~(1 << i)
-            cval |= (val & 1) << i
+            one = dtype(1)
+            i = dtype(i)
+            cval &= ~(one << i)
+            cval |= (val & one) << i
 
         if type(cval) not in signed_data_types.values():
             # mask off bits given the size of the register