doc: petab.v2.core (#360)

* doc: petab.v2.core

* inherited-members

* undoc-members

Author: dweindl

doc/conf.py

@@ -73,10 +73,10 @@
 autosummary_generate = True
 
 autodoc_default_options = {
-    "members": None,
+    "members": True,
     "imported-members": ["petab"],
-    "inherited-members": None,
-    "show-inheritance": None,
+    "show-inheritance": True,
+    "undoc-members": True,
 }
 
 # For some reason causes sphinx import errors otherwise

doc/modules.rst

@@ -31,6 +31,7 @@ API Reference
    petab.v1.yaml
    petab.v2
    petab.v2.C
+   petab.v2.core
    petab.v2.experiments
    petab.v2.lint
    petab.v2.models

petab/v1/visualize/plotting.py

@@ -833,9 +833,10 @@ def parse_from_id_list(
 
             ::
 
-                dataset_ids_per_plot = [['dataset_1', 'dataset_2'],
-                                        ['dataset_1', 'dataset_4',
-                                         'dataset_5']]
+                dataset_ids_per_plot = [
+                    ["dataset_1", "dataset_2"],
+                    ["dataset_1", "dataset_4", "dataset_5"],
+                ]
 
             or