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Update ci_pipeline.yml
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‎.github/workflows/ci_pipeline.yml‎

Lines changed: 135 additions & 135 deletions
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@@ -35,139 +35,139 @@ jobs:
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--form "variables[TEST]=true" \
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"https://gitlab.hzdr.de/api/v4/projects/6200/trigger/pipeline"
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lint:
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runs-on: ubuntu-latest
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env:
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YML: 'etc/environment-lint.yml'
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defaults:
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run:
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shell: bash -l {0}
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steps:
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- name: Checkout
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uses: actions/checkout@v1
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- name: Install Conda environment with Micromamba
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uses: mamba-org/provision-with-micromamba@main
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with:
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environment-file: ${{ env.YML }}
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- name: Code reformatting with black
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run: |
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black pySDC --check --diff --color
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- name: Linting with flakeheaven
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run: |
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flakeheaven lint --benchmark pySDC
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spawn_gitlab_and_postprocess:
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runs-on: ubuntu-latest
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# needs:
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# - lint
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defaults:
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run:
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shell: bash -l {0}
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env:
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GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
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steps:
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- name: Checkout
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uses: actions/checkout@v3
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with:
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fetch-depth: 0
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ref: ${{ github.event.pull_request.head.sha }}
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- name: Checkout benchmark repository
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uses: actions/checkout@v3
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if: ${{ github.event_name == 'push' }}
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with:
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repository: Parallel-in-Time/pySDC-benchmarks
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token: ${{ secrets.BENCHMARK_BOT }}
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path: bench
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ref: main
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- name: Install Conda environment with Micromamba
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uses: mamba-org/provision-with-micromamba@main
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with:
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environment-file: etc/environment-base.yml
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- name: Mirror + trigger CI
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uses: SvanBoxel/gitlab-mirror-and-ci-action@master
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with:
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args: "https://gitlab.hzdr.de/r.speck/pysdc"
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env:
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FORCE_PUSH: "true"
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GITLAB_HOSTNAME: "gitlab.hzdr.de"
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GITLAB_USERNAME: ${{ secrets.GITLAB_SECRET_USER }}
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GITLAB_PASSWORD: ${{ secrets.GITLAB_SECRET_PASS }}
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GITLAB_PROJECT_ID: "3525"
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GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
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- name: Get and prepare artifacts
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run: |
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pipeline_id=$(curl --header "PRIVATE-TOKEN: ${{ secrets.GITLAB_SECRET_H }}" --silent "https://gitlab.hzdr.de/api/v4/projects/3525/repository/commits/${{ github.head_ref || github.ref_name }}" | jq '.last_pipeline.id')
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job_id=$(curl --header "PRIVATE-TOKEN: ${{ secrets.GITLAB_SECRET_H }}" --silent "https://gitlab.hzdr.de/api/v4/projects/3525/pipelines/$pipeline_id/jobs" | jq '.[] | select( .name == "bundle" ) | select( .status == "success" ) | .id')
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curl --output artifacts.zip "https://gitlab.hzdr.de/api/v4/projects/3525/jobs/$job_id/artifacts"
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rm -rf data
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unzip artifacts.zip
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- name: Generate Coverage badge
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run: |
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pip install genbadge[all]
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genbadge coverage -i coverage.xml -o htmlcov/coverage-badge.svg
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- name: Generate benchmark report
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uses: pancetta/github-action-benchmark@v1
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if: ${{ (!contains(github.event.head_commit.message, '[CI-no-benchmarks]')) && (github.event_name == 'push') }}
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with:
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name: pySDC Benchmark with pytest-benchmark
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tool: 'pytest'
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output-file-path: benchmarks/output.json
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auto-push: false
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skip-fetch-gh-pages: true
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benchmark-data-dir-path: bench/${{ github.head_ref || github.ref_name }}
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github-token: ${{ secrets.GITHUB_TOKEN }}
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- name: Push benchmark data
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uses: dmnemec/copy_file_to_another_repo_action@main
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if: "!contains(github.event.head_commit.message, '[CI-no-benchmarks]')"
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env:
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API_TOKEN_GITHUB: ${{ secrets.BENCHMARK_BOT }}
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with:
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source_file: 'bench/${{ github.head_ref || github.ref_name }}'
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destination_repo: 'Parallel-in-Time/pySDC-benchmarks'
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user_email: '[email protected]'
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user_name: 'pancetta'
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- name: Build html I
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run: |
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chmod u+x ./docs/update_apidocs.sh
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./docs/update_apidocs.sh
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sphinx-build -b html docs/source docs/build/html
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mkdir -p docs/build/html/coverage
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mv htmlcov/* docs/build/html/coverage/.
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- name: Build html II
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if: "!contains(github.event.head_commit.message, '[CI-no-benchmarks]')"
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run: |
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mkdir -p docs/build/html/benchmarks
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cp -r bench/${{ github.head_ref || github.ref_name }}/* docs/build/html/benchmarks/.
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- name: Store docs
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uses: actions/upload-artifact@v2
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with:
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name: docs
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path: docs/build/html
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# - name: Deploy 🚀
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# uses: JamesIves/[email protected]
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# if: ${{ github.event_name == 'push' && github.repository_owner == 'Parallel-in-Time' && github.ref == 'refs/heads/master' && !env.ACT }}
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# lint:
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# runs-on: ubuntu-latest
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#
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# env:
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# YML: 'etc/environment-lint.yml'
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#
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# defaults:
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# run:
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# shell: bash -l {0}
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#
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# steps:
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# - name: Checkout
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# uses: actions/checkout@v1
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#
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# - name: Install Conda environment with Micromamba
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# uses: mamba-org/provision-with-micromamba@main
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# with:
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# environment-file: ${{ env.YML }}
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#
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# - name: Code reformatting with black
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# run: |
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# black pySDC --check --diff --color
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#
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# - name: Linting with flakeheaven
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# run: |
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# flakeheaven lint --benchmark pySDC
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#
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#
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# spawn_gitlab_and_postprocess:
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# runs-on: ubuntu-latest
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#
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## needs:
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## - lint
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#
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# defaults:
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# run:
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# shell: bash -l {0}
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#
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# env:
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# GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
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#
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# steps:
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# - name: Checkout
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# uses: actions/checkout@v3
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# with:
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# fetch-depth: 0
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# ref: ${{ github.event.pull_request.head.sha }}
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#
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# - name: Checkout benchmark repository
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# uses: actions/checkout@v3
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# if: ${{ github.event_name == 'push' }}
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# with:
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# repository: Parallel-in-Time/pySDC-benchmarks
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# token: ${{ secrets.BENCHMARK_BOT }}
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# path: bench
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# ref: main
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#
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# - name: Install Conda environment with Micromamba
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# uses: mamba-org/provision-with-micromamba@main
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# with:
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# environment-file: etc/environment-base.yml
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#
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# - name: Mirror + trigger CI
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# uses: SvanBoxel/gitlab-mirror-and-ci-action@master
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# with:
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# args: "https://gitlab.hzdr.de/r.speck/pysdc"
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# env:
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# FORCE_PUSH: "true"
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# GITLAB_HOSTNAME: "gitlab.hzdr.de"
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# GITLAB_USERNAME: ${{ secrets.GITLAB_SECRET_USER }}
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# GITLAB_PASSWORD: ${{ secrets.GITLAB_SECRET_PASS }}
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# GITLAB_PROJECT_ID: "3525"
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# GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
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#
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# - name: Get and prepare artifacts
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# run: |
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# pipeline_id=$(curl --header "PRIVATE-TOKEN: ${{ secrets.GITLAB_SECRET_H }}" --silent "https://gitlab.hzdr.de/api/v4/projects/3525/repository/commits/${{ github.head_ref || github.ref_name }}" | jq '.last_pipeline.id')
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# job_id=$(curl --header "PRIVATE-TOKEN: ${{ secrets.GITLAB_SECRET_H }}" --silent "https://gitlab.hzdr.de/api/v4/projects/3525/pipelines/$pipeline_id/jobs" | jq '.[] | select( .name == "bundle" ) | select( .status == "success" ) | .id')
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# curl --output artifacts.zip "https://gitlab.hzdr.de/api/v4/projects/3525/jobs/$job_id/artifacts"
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# rm -rf data
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# unzip artifacts.zip
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#
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# - name: Generate Coverage badge
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# run: |
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# pip install genbadge[all]
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# genbadge coverage -i coverage.xml -o htmlcov/coverage-badge.svg
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#
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# - name: Generate benchmark report
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# uses: pancetta/github-action-benchmark@v1
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# if: ${{ (!contains(github.event.head_commit.message, '[CI-no-benchmarks]')) && (github.event_name == 'push') }}
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# with:
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# name: pySDC Benchmark with pytest-benchmark
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# tool: 'pytest'
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# output-file-path: benchmarks/output.json
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# auto-push: false
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# skip-fetch-gh-pages: true
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# benchmark-data-dir-path: bench/${{ github.head_ref || github.ref_name }}
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# github-token: ${{ secrets.GITHUB_TOKEN }}
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#
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# - name: Push benchmark data
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# uses: dmnemec/copy_file_to_another_repo_action@main
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# if: "!contains(github.event.head_commit.message, '[CI-no-benchmarks]')"
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# env:
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# API_TOKEN_GITHUB: ${{ secrets.BENCHMARK_BOT }}
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# with:
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# source_file: 'bench/${{ github.head_ref || github.ref_name }}'
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# destination_repo: 'Parallel-in-Time/pySDC-benchmarks'
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# user_email: '[email protected]'
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# user_name: 'pancetta'
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#
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# - name: Build html I
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# run: |
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# chmod u+x ./docs/update_apidocs.sh
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# ./docs/update_apidocs.sh
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# sphinx-build -b html docs/source docs/build/html
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# mkdir -p docs/build/html/coverage
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# mv htmlcov/* docs/build/html/coverage/.
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#
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# - name: Build html II
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# if: "!contains(github.event.head_commit.message, '[CI-no-benchmarks]')"
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# run: |
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# mkdir -p docs/build/html/benchmarks
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# cp -r bench/${{ github.head_ref || github.ref_name }}/* docs/build/html/benchmarks/.
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#
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# - name: Store docs
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# uses: actions/upload-artifact@v2
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# with:
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# branch: gh-pages # The branch the action should deploy to.
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# folder: docs/build/html # The folder the action should deploy.
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# name: docs
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# path: docs/build/html
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#
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## - name: Deploy 🚀
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## uses: JamesIves/[email protected]
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## if: ${{ github.event_name == 'push' && github.repository_owner == 'Parallel-in-Time' && github.ref == 'refs/heads/master' && !env.ACT }}
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## with:
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## branch: gh-pages # The branch the action should deploy to.
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## folder: docs/build/html # The folder the action should deploy.

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