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1 parent 394055e commit 0014b30Copy full SHA for 0014b30
workflow/scripts/format_vcf_fields_longer.R
@@ -34,7 +34,7 @@ read_tsv(snakemake@input$tsv) %>%
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convert = TRUE
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) %>%
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# Separate &-delimited error column (more than one error/warning/info message per row is possible)
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- separate_rows_if_exist("ERRORS", sep = snakemake@params$sep) %>%
+ separate_rows_if_exist("ERRORS", sep = "&") %>%
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# Rename "...[*]..." columns using the provided lookup via Snakemake config
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rename(all_of(unlist(snakemake@params$colnames_mapping))) %>%
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# Apply dynamic filters from the Snakemake config:
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