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davidjpmooredavidjpmoore
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This version represents additions made over a period of months
by Dave Moore and John Zobitz. changes to the code will be made more frequently from now on sipnet.c This version of SIPNET builds on Bill Sacks ([email protected]) variable timestep version. This version contains options for computing transpiration 1)Ball Berry (working) 2)Penman Monteith (gives nonsense results) written by Dave Moore ([email protected]) This version also contains a suite of below ground options written by John Zobitz ([email protected]), including a soil quality model and explicit methods of tracking microbes niwots.param includes several new parameters required to run the various additions to sipnet.c e.g. the Ball Berry slope m niwots.spd updated to allow for the inclusion of half daily input up to the end of 2005 niwots.clim (addition of two climate variables Net Radiation and Soil Heat Flux) These two new variables are required for the Penman Monteith transpiration calculation and will probably be removed later. Updated to include climate data up to the end of 2005 niwots.dat niwots.valid updated to include flux data up to the end of 2005 git-svn-id: svn://cgdm-bishorn.wlclient.ucar.edu/Users/sacks/temporary/sipnet.svn/trunk@11 c88c3319-8f09-0410-a662-fffcf0821eeb
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7 files changed

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-18310
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7 files changed

+22090
-18310
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‎niwots.clim‎

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‎niwots.dat‎

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‎niwots.out‎

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‎niwots.param‎

Lines changed: 84 additions & 54 deletions
Original file line numberDiff line numberDiff line change
@@ -1,54 +1,84 @@
1-
plantWoodInit 9600 0 6600 14000 200.000000
2-
laiInit 4.2 0 3.2 5.2 0.2
3-
litterInit 400 0 130 1200 25
4-
soilInit 16000 0 3300 19000 3000.000000
5-
litterWFracInit 0.5 0 0.0 1.0 0.1
6-
soilWFracInit 0.5 1 0.0 1.0 0.1
7-
snowInit 0.0 0 0.0 0.0 1.0
8-
aMax 8.3 1 0 34 0.2
9-
aMaxFrac 0.76 0 0.66 0.86 0.005000
10-
baseFolRespFrac 0.1 1 0.050000 0.300000 0.005000
11-
psnTMin 2 1 -8.000000 8.000000 0.500000
12-
psnTOpt 24 1 5.000000 30.000000 0.500000
13-
vegRespQ10 2.0 1 1.400000 2.600000 0.050000
14-
growthRespFrac 0.2 0 0.1 0.3 0.05
15-
frozenSoilFolREff 0 0 0 1 0.2
16-
frozenSoilThreshold 0 1 -5 5 0.5
17-
dVpdSlope 0.05 1 0.010000 0.250000 0.005000
18-
dVpdExp 2.0 0 1.000000 3.000000 0.200000
19-
halfSatPar 17 1 4 27 5.000000
20-
attenuation 0.5 0 0.380000 0.620000 0.040000
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leafOnDay 144 0 91.000000 181.000000 15.000000
22-
gddLeafOn 500 0 100 900 200
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soilTempLeafOn 12.0 0 8.0 16.0 1.0
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leafOffDay 285 0 243.000000 319.000000 15.000000
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leafGrowth 0 0 0 252 10
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fracLeafFall 0 0 0 1 0.1
27-
leafAllocation 0.22 1 0 1 0.04
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leafTurnoverRate 0.13 0 0.07 0.5 0.03
29-
baseVegResp 0.006 1 0.0006 0.06 0.000020
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litterBreakdownRate 0.4 0 0.13 1.2 0.1
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fracLitterRespired 0.5 0 0.4 0.6 0.1
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baseSoilResp 0.06 1 0.003 0.6 0.000050
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baseSoilRespCold 0.03 0 0.006 0.15 0.000050
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soilRespQ10 2.0 1 1.400000 5 0.050000
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soilRespQ10Cold 2.0 0 1.400000 3.5 0.050000
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coldSoilThreshold 1.0 0 -2.0 4.0 0.5
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E0 309 0 0 618 20
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T0 -46 0 -273 -25 5
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soilRespMoistEffect 1.0 0 0.000000 2.000000 0.100000
40-
waterRemoveFrac 0.08 1 0.001 0.160000 0.008000
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frozenSoilEff 0 0 0 1 0.2
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wueConst 10.9 1 0.01 109 0.5
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litterWHC 1 0 0.01 4.0 0.25
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soilWHC 12.0 1 0.1 36.000000 1.000000
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immedEvapFrac 0.1 0 0 0.2 0.025
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fastFlowFrac 0.1 0 0 0.2 0.025
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snowMelt 0.15 0 0.05 0.25 0.02
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litWaterDrainRate 0.1 0 0.01 1.0 0.1
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rdConst 300 1 1 1500 75
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rSoilConst1 8.2 0 0 16.4 2
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rSoilConst2 4.3 0 0 8.6 1
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leafCSpWt 270 0 63 500 0
53-
cFracLeaf 0.45 0 0.400000 0.500000 0.010000
54-
turnoverRate 0.014 0 0.003 0.3 0.001
1+
plantWoodInit 9600.000000 0 6600.000000 14000.000 200.000000
2+
laiInit 4.200000 0 3.200000 5.200000 0.200000
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litterInit 400.000000 0 130.000000 1200.0000 25.000000
4+
soilInit 16000.00000 0 3300.000000 19000.000 3000.000000
5+
litterWFracInit 0.500000 0 0.000000 1.000000 0.100000
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soilWFracInit 0.020000 0 0.000000 1.00000 0.100000
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snowInit 0.000000 0 0.000000 0.000000 1.000000
8+
aMax 4.790000 0 0.0000 34.000000 0.200000
9+
aMaxFrac 0.760000 0 0.660000 0.860000 0.005000
10+
baseFolRespFrac 0.097000 0 0.050000 0.300000 0.005000
11+
psnTMin -2.970000 0 -8.000000 8.000000 0.500000
12+
psnTOpt 14.300000 0 5.000000 30.000000 0.500000
13+
vegRespQ10 1.400000 0 1.400000 2.600000 0.050000
14+
growthRespFrac 0.200000 0 0.100000 0.300000 0.050000
15+
frozenSoilFolREff 0.000000 0 0.000000 1.000000 0.200000
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frozenSoilThreshold 0.106000 0 -5.000000 5.000000 0.500000
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dVpdSlope 0.127000 0 0.010000 0.250000 0.005000
18+
dVpdExp 2.000000 0 1.000000 3.000000 0.200000
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halfSatPar 7.400000 0 4.000000 27.000000 5.000000
20+
attenuation 0.500000 0 0.380000 0.620000 0.040000
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leafOnDay 144.000000 0 91.000000 181.000000 15.000000
22+
gddLeafOn 500.000000 0 100.000000 900.000000 200.000000
23+
soilTempLeafOn 12.000000 0 8.000000 16.000000 1.000000
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leafOffDay 285.000000 0 243.000000 319.000000 15.000000
25+
leafGrowth 0.000000 0 0.000000 252.000000 10.000000
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fracLeafFall 0.000000 0 0.000000 1.000000 0.100000
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leafAllocation 0.400000 0 0.000000 1.000000 0.040000
28+
leafTurnoverRate 0.130000 0 0.070000 0.500000 0.030000
29+
baseVegResp 0.027000 0 0.000600 0.060000 0.000020
30+
litterBreakdownRate 0.400000 0 0.130000 1.200000 0.100000
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fracLitterRespired 0.500000 0 0.400000 0.600000 0.100000
32+
baseSoilResp 0.00600 1 0.003000 0.600000 0.000050
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baseSoilRespEpsilon 0.000000 0 0.000000 1.000000 0.000050
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baseSoilRespCold 0.301000 0 0.003000 0.600000 0.000050
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baseSoilRespColdEpsilon 0.000000 0 0.000000 1.000000 0.000050
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soilRespQ10 2.730000 0 1.400000 5.000000 0.050000
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soilRespQ10Epsilon 0.000000 0 0.000000 1.000000 0.050000
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soilRespQ10Cold 2.450000 0 1.400000 3.500000 0.050000
39+
soilRespQ10ColdEpsilon 0.000000 0 0.000000 1.000000 0.050000
40+
coldSoilThreshold 1.000000 0 -2.000000 4.000000 0.500000
41+
E0 309.000000 0 0.000000 618.000000 20.000000
42+
T0 -46.000000 0 -273.000000 -25.000000 5.000000
43+
soilRespMoistEffect 1.000000 0 0.000000 2.000000 0.100000
44+
waterRemoveFrac 0.088000 0 0.001000 0.160000 0.008000
45+
frozenSoilEff 0.000000 0 0.000000 1.000000 0.200000
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wueConst 47.700000 0 0.010000 109.000000 0.500000
47+
litterWHC 1.000000 0 0.010000 4.000000 0.250000
48+
soilWHC 4.080000 0 0.100000 36.000000 1.000000
49+
immedEvapFrac 0.100000 0 0.000000 0.200000 0.025000
50+
fastFlowFrac 0.100000 0 0.000000 0.200000 0.025000
51+
snowMelt 0.150000 0 0.050000 0.250000 0.020000
52+
litWaterDrainRate 0.100000 0 0.010000 1.000000 0.100000
53+
rdConst 36.500000 0 1.000000 1500.000000 75.000000
54+
rSoilConst1 8.200000 0 0.000000 16.400000 2.000000
55+
rSoilConst2 4.300000 0 0.000000 8.600000 1.000000
56+
leafCSpWt 270.000000 0 63.000000 500.000000 0.000000
57+
cFracLeaf 0.450000 0 0.400000 0.500000 0.010000
58+
turnoverRate 0.014000 0 0.003000 0.300000 0.001000
59+
qualityLeaf 0.700000 0 0.000000 1.000000 0.001000
60+
qualityWood 0.300000 0 0.000000 1.000000 0.001000
61+
efficiency 0.450000 0 0.100000 0.900000 0.001000
62+
efficiencyEpsilon 0.000000 0 0.000000 1.000000 0.001000
63+
maxIngestionRate 0.145000 0 0.010000 0.50000 0.010000
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maxIngestionRateEpsilon 0.000000 0 0.000000 1.000000 0.010000
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halfSatIngestion 5000 0 0.000000 10000.00000 0.001000
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totNitrogen 0.02 0 0.005000 0.300000 0.001000
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microbeNC 0.2 0 0.10000 0.50000 0.001000
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microbeInit 0.50 0 0.020000 1.000000 0.001000
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fineRootFrac 0.200000 0 0.000000 1.000000 0.001000
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coarseRootFrac 0.200000 0 0.000000 1.000000 0.001000
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fineRootAllocation 0.400000 0 0.000000 0.600000 0.001000
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woodAllocation 0.200000 0 0.000000 0.600000 0.001000
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fineRootExudation 0.0100000 0 0.000000 1.000000 0.001000
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coarseRootExudation 0.0100000 0 0.000000 1.000000 0.001000
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fineRootTurnover 0.137 1 0.100000 36.500000 0.001000
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coarseRootTurnover 0.056 1 0.050000 0.500000 0.001000
77+
baseFineRootResp 0.090 1 0.003000 0.600000 0.001000
78+
baseCoarseRootResp 0.006 1 0.003000 0.600000 0.001000
79+
fineRootQ10 2.600000 0 1.400000 5.000000 0.050000
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coarseRootQ10 2.600000 0 1.400000 5.000000 0.050000
81+
baseMicrobeResp 0.0004 0 0.0003 0.005000 0.000100
82+
microbeQ10 2.3 0 1.400000 5.000000 0.050000
83+
microbePulseEff 0.5 0 0.0000 1.0000 0.050000
84+
m_ballBerry 3.890000 0 0.500000 8.000000 0.500000

‎niwots.spd‎

Lines changed: 1 addition & 1 deletion
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1998 305 3 2 #2251 -1
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1998 305 3 2 #2617 -1

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