Don't reuse T2star map.

tsalo · tsalo · commit a1bde3a31d08 · 2025-03-13T11:34:43.000-04:00
diff --git a/.gitignore b/.gitignore
@@ -1,4 +1,5 @@
 # Custom (PennLINC) gitignore
+processing/slurm-*.out
 curation/jobs/
 processing/jobs/
 .DS_Store
diff --git a/processing/run_tedana.py b/processing/run_tedana.py
@@ -218,7 +218,7 @@ def run_tedana(raw_dir, fmriprep_dir, aroma_dir, temp_dir, tedana_out_dir):
             mixm=mixing2,
             gscontrol=["mir"],
             tedort=True,
-            t2smap=t2star,
+            # t2smap=t2star,
         )
 
 
diff --git a/processing/slurm-6025857.out b/processing/slurm-6025857.out

Original file line number	Diff line number	Diff line change
`@@ -218,7 +218,7 @@ def run_tedana(raw_dir, fmriprep_dir, aroma_dir, temp_dir, tedana_out_dir):`
`218`	`218`	`mixm=mixing2,`
`219`	`219`	`gscontrol=["mir"],`
`220`	`220`	`tedort=True,`
`221`		`- t2smap=t2star,`
	`221`	`+ # t2smap=t2star,`
`222`	`222`	`)`
`223`	`223`
`224`	`224`