Add README.md to .Rbuildignore

Author: dtkaplan

.Rbuildignore

@@ -2,6 +2,7 @@
 ^\.Rproj\.user$
 cran-comments.md
 ^README\.Rmd$
+^README\.md$
 ^README-.*\.png$
 ^NEWS\.md$
 ^\.travis\.yml$

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: mosaicModel
 Type: Package
-Title: Provide a consistent interface to a range of statistical model architectures
+Title: Provide a Consistent Interface to a Range of Statistical Model Architectures
 Version: 0.3.0
 Author: Kaplan Daniel [aut, cre],
   Pruim Randall [aut, cre]

cran-comments.md

@@ -1,23 +1,13 @@
 ## Test environments
 * local OS X install, R 3.4.1
-* ubuntu 12.04 (on travis-ci), R 3.1.2
+* ubuntu 14.04.5 (on travis-ci), R 3.4.1
 * win-builder (devel and release)
 
 ## R CMD check results
 There were no ERRORs or WARNINGs. 
 
-There was 1 NOTE:
-
-
-  
-There are currently no downstream dependencies for this package
+There was 1 NOTE: "New submission"
 
 ## Downstream dependencies
-I have also run R CMD check on downstream dependencies of httr 
-(https://github.com/wch/checkresults/blob/master/httr/r-release). 
-All packages that I could install passed except:
 
-* Ecoengine: this appears to be a failure related to config on 
-  that machine. I couldn't reproduce it locally, and it doesn't 
-  seem to be related to changes in httr (the same problem exists 
-  with httr 0.4).
+There are currently no downstream dependencies for this package

vignettes/Basics.R

@@ -37,9 +37,10 @@ mod_plot(iris_mod_1) %>% gf_theme(legend.position = "top")
 mod_plot(iris_mod_2, class_level = "setosa") %>% 
   gf_theme(legend.position = "top")
 
-## ----fig.out="40%", fig.keep = "hold", eval = FALSE----------------------
-#  mod_plot(iris_mod_2, ~ Petal.Length + Petal.Width) %>% gf_theme(legend.position = "top")
-#  mod_plot(iris_mod_2, ~ Petal.Length + Petal.Width + Sepal.Width) %>% gf_theme(legend.position = "top")
+## ----fig.out="40%", fig.keep = "hold"------------------------------------
+mod_plot(iris_mod_2, ~ Petal.Length + Petal.Width) %>% gf_theme(legend.position = "top")
+mod_plot(iris_mod_2, ~ Petal.Length + Petal.Width + Sepal.Width) %>%
+  gf_theme(legend.position = "top")
 
 ## ------------------------------------------------------------------------
 mod_eval(fuel_mod_1, transmission = "manual", hp = 200)
@@ -64,19 +65,19 @@ mod_effect(fuel_mod_2, ~ hp, nlevels = 3)
 ## ------------------------------------------------------------------------
 mod_effect(fuel_mod_2, ~ hp, step = 0.1, nlevels = 1)
 
-## ----eval = FALSE--------------------------------------------------------
-#  mod_effect(iris_mod_2, ~ Sepal.Length, step = 0.01, class_level = "virginica" )
-#  mod_effect(iris_mod_2, ~ Sepal.Length, step = 1, class_level = "virginica")
+## ------------------------------------------------------------------------
+mod_effect(iris_mod_2, ~ Sepal.Length, step = 0.01, class_level = "virginica" )
+mod_effect(iris_mod_2, ~ Sepal.Length, step = 1, class_level = "virginica")
 
 ## ------------------------------------------------------------------------
 mod_error(fuel_mod_2)
 
 ## ------------------------------------------------------------------------
 mod_error(fuel_mod_2, testdata = mtcars[1:10,])
 
-## ----eval=FALSE----------------------------------------------------------
-#  mod_error(iris_mod_2, error_type = "class_error")
-#  mod_error(iris_mod_2, error_type = "LL")
+## ------------------------------------------------------------------------
+mod_error(iris_mod_2, error_type = "class_error")
+mod_error(iris_mod_2, error_type = "LL")
 
 ## ------------------------------------------------------------------------
 ensemble_fuel_1 <- mod_ensemble(fuel_mod_1, nreps = 10)
@@ -112,7 +113,7 @@ data_from_mod(my_mod) %>% head(2)
 ## ----error = TRUE--------------------------------------------------------
 construct_fitting_call(my_mod, data_name = "placeholder")
 
-## ----eval = FALSE--------------------------------------------------------
+## ----eval=FALSE----------------------------------------------------------
 #  mod_eval_fun(my_mod)
 
 ## ------------------------------------------------------------------------