Quarto output

Author: MartinSchobben

.isort.cfg

@@ -1,2 +1,2 @@
 [settings]
-known_third_party =
+known_third_party =IPython,envrs,matplotlib,numpy,pandas,rasterio,shapely,statsmodels,xarray

_toc.yml

@@ -18,7 +18,12 @@ parts:
           - file: notebooks/courses/microwave-remote-sensing/unit_03/09_in_class_exercise
       - file: notebooks/courses/environmental-remote-sensing
         sections:
-          - file: notebooks/courses/environmental-remote-sensing/mozambique-droughts
+          - file: notebooks/courses/environmental-remote-sensing/unit_01/01_handout_drought
+          - file: notebooks/courses/environmental-remote-sensing/unit_01/02_handout_drought
+          - file: notebooks/courses/environmental-remote-sensing/unit_01/03_handout_drought
+          - file: notebooks/courses/environmental-remote-sensing/unit_01/04_handout_drought
+          - file: notebooks/courses/environmental-remote-sensing/unit_01/05_supplement_drought
+          - file: notebooks/courses/environmental-remote-sensing/unit_01/06_supplement_drought
   - caption: Templates
     chapters:
       - file: notebooks/templates/prereqs-templates

environment.yml

@@ -1,45 +1,59 @@
-name: eo-datascience-cookbook-dev
+name: eo-datascience-cookbook
 channels:
   - conda-forge
 dependencies:
   - aiohttp
+  - black
   - bokeh
   - cartopy
   - cmcrameri
   - dask
   - datashader
+  - earthaccess
+  - ffmpeg
+  - fiona
+  - flake8-nb
   - folium
   - fsspec
   - geopandas
   - geoviews
   - graphviz
+  - hda
   - holoviews
+  - huggingface_hub
   - hvplot
+  - importlib-metadata==4.13.0
   - intake
   - intake-xarray
   - ipykernel
-  - jupyter
+  - isort
   - jupyter-book
-  - jupyterlab
-  - jupyterlab-myst
   - jupyter-cache
+  - jupyter-server-proxy
+  - jupyter==1.1.1
   - jupyter_bokeh
+  - jupyterlab==4.2.5
+  - jupyterlab_server==2.27.3
+  - jupyterlab_widgets==3.0.13
+  - lxml
   - mamba
   - matplotlib
-  - mystmd
   - nbformat
+  - nbqa
   - nbstripout
   - nodejs
   - numpy
   - odc-stac
+  - openpyxl
   - openssl
   - pandas
   - pip
   - pre-commit
+  - pyogrio
   - pyproj
   - pystac-client
   - pytest
-  - python=3.12
+  - python==3.13
   - rasterio
   - requests
   - rioxarray
@@ -50,7 +64,16 @@ dependencies:
   - snaphu
   - sphinx-pythia-theme
   - stackstac
+  - statsmodels
   - xarray
-  - zarr=2.18.4
+  - zarr==2.18.4
   - pip:
+      - ascat
+      - notebooks/courses/environmental-remote-sensing
+      - pdbufr
+      - pre-commit
+      - pynetcf
+      - pyswi
+      - python-dotenv
       - python-gitlab
+      - pyviz_comms==3.0.4

notebooks/courses/environmental-remote-sensing.ipynb

@@ -32,19 +32,7 @@
    "display_name": "Python 3 (ipykernel)",
    "language": "python",
    "name": "python3",
-   "path": "/opt/hostedtoolcache/Python/3.11.12/x64/share/jupyter/kernels/python3"
-  },
-  "language_info": {
-   "codemirror_mode": {
-    "name": "ipython",
-    "version": 3
-   },
-   "file_extension": ".py",
-   "mimetype": "text/x-python",
-   "name": "python",
-   "nbconvert_exporter": "python",
-   "pygments_lexer": "ipython3",
-   "version": "3.11.12"
+   "path": "/usr/share/jupyter/kernels/python3"
   }
  },
  "nbformat": 4,