appease linter

Author: akgohain

.github/workflows/app-build.yml

@@ -1,7 +1,7 @@
 ---
 name: Client App Build and Test
 
-on:
+'on':
   push:
     branches:
       - main
@@ -47,7 +47,7 @@ jobs:
           npm run build
           npm run electron &
           ELECTRON_PID=$!
-          sleep 150 
+          sleep 150
           if ps -p "$ELECTRON_PID" > /dev/null; then
             echo 'Electron app is still running, Ending the process.'
             kill "$ELECTRON_PID"

.github/workflows/docker-test.yml

@@ -1,7 +1,7 @@
 ---
 name: Docker Build and Smoke Test
 
-on:
+'on':
   push:
     branches:
       - main
@@ -38,11 +38,17 @@ jobs:
 
       - name: Build backend image
         working-directory: pytc-client
-        run: docker build -t pytc-backend .
+        run: |
+          docker build -t pytc-backend .
 
       - name: Run backend container
         working-directory: pytc-client
-        run: docker run -d --name pytc-backend -p 4242:4242 -p 4243:4243 pytc-backend
+        run: |
+          docker run -d \
+            --name pytc-backend \
+            -p 4242:4242 \
+            -p 4243:4243 \
+            pytc-backend
 
       - name: Wait for API health
         run: |
@@ -59,7 +65,10 @@ jobs:
 
       - name: Check PyTC service
         run: |
-          curl -fsS http://localhost:4243/hello || (docker logs pytc-backend && exit 1)
+          if ! curl -fsS http://localhost:4243/hello; then
+            docker logs pytc-backend || true
+            exit 1
+          fi
 
       - name: Cleanup container
         if: always()

.github/workflows/superlinter.yml

@@ -1,7 +1,8 @@
 ---
 name: Super-Linter
 
-on: push
+'on':
+  push: {}
 
 jobs:
   super-lint:

.yamllint

@@ -0,0 +1,8 @@
+---
+extends: default
+
+ignore: |
+  .venv/
+  node_modules/
+  outputs/
+  pytorch_connectomics/

README.md

@@ -2,9 +2,12 @@
 
 ## Recommended Setup (uv)
 
-We strongly recommend using [uv](https://docs.astral.sh/uv/) because it bundles Python 3.11, installs dependencies in seconds, and keeps the workflow to two commands.
+We strongly recommend using [uv](https://docs.astral.sh/uv/) because it bundles
+Python 3.11, installs dependencies in seconds, and keeps the workflow to two
+commands.
+
+### Requirements (uv)
 
-**Prerequisites**
 - [git](https://git-scm.com/)
 - [uv](https://docs.astral.sh/uv/)
 - [Node.js](https://nodejs.org/) 18+ (includes npm)
@@ -23,26 +26,36 @@ scripts\bootstrap.ps1                   # Windows PowerShell
 start.bat                               # Windows CMD
 ```
 
-This starts both FastAPI services under uv, runs the Electron client, and cleans up the servers when you close the UI. Re-run the bootstrap script any time you need to refresh dependencies.
+This starts both FastAPI services under uv, runs the Electron client, and cleans
+up the servers when you close the UI. Re-run the bootstrap script any time you
+need to refresh dependencies.
 
 ## Containerized Backend (Docker)
 
-Prefer to keep everything in a container? The provided image uses uv inside the container so the backend is ready in one build step. This target runs the FastAPI API (`:4242`), the PyTC worker service (`:4243`), the Neuroglancer bridge (`:4244`), and TensorBoard (`:6006`). Electron is not included—use your local client or Electron build to talk to the containerised backend.
+Prefer to keep everything in a container? The provided image uses uv inside the
+container so the backend is ready in one build step. This target runs the
+FastAPI API (`:4242`), the PyTC worker service (`:4243`), the Neuroglancer
+bridge (`:4244`), and TensorBoard (`:6006`). Electron is not included—use your
+local client or Electron build to talk to the containerised backend.
+
+### Requirements (Docker)
 
-**Prerequisites**
 - Docker with Compose V2 (`docker compose`)
 
-**Build the image**
+### Build the image
+
 ```bash
 docker compose build backend
 ```
 
-**Run the backend services**
+### Run the backend services
+
 ```bash
 docker compose up backend
 ```
 
 When you are done:
+
 ```bash
 docker compose down
 ```
@@ -51,39 +64,51 @@ You can now point the desktop client at `http://localhost:4242`.
 
 ## Legacy Manual Setup (without uv)
 
-If you prefer to manage Python environments yourself, follow the steps below. Expect a slower install and more moving pieces.
+If you prefer to manage Python environments yourself, follow the steps below.
+Expect a slower install and more moving pieces.
+
+### Requirements (manual)
 
-**Prerequisites**
 - Python 3.9–3.11 (conda, pyenv, or system Python)
 - [git](https://git-scm.com/)
 - [Node.js](https://nodejs.org/) 18+ (includes npm)
 
 1. **Create / activate an environment**
+
    ```bash
    python -m venv .venv
    source .venv/bin/activate        # Windows: .\.venv\Scripts\activate
    ```
+
 2. **Install backend dependencies**
+
    ```bash
    pip install -r server_api/requirements.txt
    ```
+
 3. **Download & install pytorch_connectomics**
+
    ```bash
    ./setup_pytorch_connectomics.sh
    pip install -e pytorch_connectomics
    ```
+
 4. **Install frontend dependencies**
+
    ```bash
    cd client
    npm install
    cd ..
    ```
+
 5. **Run the app (three terminals or background processes)**
+
    ```bash
    python server_api/main.py
    python server_pytc/main.py
    cd client && npm run electron
    ```
 
 ## Video Demo
+
 [Video walkthrough](https://www.loom.com/share/45c09b36bf37408fb3e5a9172e427deb?sid=2777bf8f-a705-4d47-b17a-adf882994168)

docker-compose.yaml

@@ -1,3 +1,4 @@
+---
 version: "3.9"
 
 services: