Fix QTT for QCodes 0.38 (#877)

Make QTT compatible with the new version of QCodes which split some functions into a separate qcodes_loop package.

Author: bkreynen

docs/calibrations.rst

@@ -49,6 +49,6 @@ An example of a calibration result
 Storage
 -------
 
-The DataSet objects are stored with the qcodes :code:`qcodes.data.gnuplot_format.GNUPlotFormat` or
-the :code:`qcodes.data.hdf5_format.HDF5FormatMetadata`. For storage of other objects
-we recommend to use HDF5.
+The DataSet objects are stored with the qcodes :code:`qcodes_loop.data.gnuplot_format.GNUPlotFormat` or
+the :code:`qcodes_loop.data.hdf5_format.HDF5FormatMetadata`. For storage of other objects
+we recommend to use HDF5.

docs/notebooks/analysis/example_PAT_fitting.ipynb

@@ -32,7 +32,7 @@
    "outputs": [],
    "source": [
     "import os, sys\n",
-    "import qcodes\n",
+    "import qcodes_loop\n",
     "import scipy.constants\n",
     "import matplotlib.pyplot as plt\n",
     "import numpy as np\n",

docs/notebooks/analysis/example_anticrossing.ipynb

@@ -22,7 +22,7 @@
    "source": [
     "# import the modules used in this program:\n",
     "import sys, os, time\n",
-    "import qcodes\n",
+    "import qcodes_loop\n",
     "import numpy as np\n",
     "\n",
     "import matplotlib.pyplot as plt\n",

docs/notebooks/analysis/example_charge_sensor.ipynb

@@ -23,13 +23,13 @@
    "outputs": [],
    "source": [
     "import os\n",
-    "import qcodes\n",
+    "import qcodes_loop\n",
     "import matplotlib.pyplot as plt\n",
     "import time\n",
     "import numpy as np\n",
     "import scipy\n",
     "\n",
-    "from qcodes.data.hdf5_format import HDF5Format\n",
+    "from qcodes_loop.data.hdf5_format import HDF5Format\n",
     "\n",
     "import qtt\n",
     "import qtt.pgeometry\n",

docs/notebooks/analysis/example_coulomb_peak.ipynb

@@ -22,7 +22,7 @@
    "source": [
     "import os\n",
     "import numpy as np\n",
-    "import qcodes\n",
+    "import qcodes_loop\n",
     "from qcodes.plots.qcmatplotlib import MatPlot\n",
     "import matplotlib.pyplot as plt\n",
     "%matplotlib inline\n",

docs/notebooks/analysis/example_doublegauss_expdecay_rts.ipynb

@@ -23,8 +23,8 @@
    "outputs": [],
    "source": [
     "import os\n",
-    "import qcodes\n",
-    "from qcodes.data.data_set import DataSet\n",
+    "import qcodes_loop\n",
+    "from qcodes_loop.data.data_set import DataSet\n",
     "import qtt\n",
     "\n",
     "%matplotlib inline\n",
@@ -48,7 +48,7 @@
    "outputs": [],
    "source": [
     "exampledatadir=os.path.join(qtt.__path__[0], 'exampledata')\n",
-    "DataSet.default_io = qcodes.data.io.DiskIO(exampledatadir)\n",
+    "DataSet.default_io = qcodes_loop.data.io.DiskIO(exampledatadir)\n",
     "dataset = qtt.data.load_dataset('rts_signal')\n",
     "\n",
     "rtsdata = dataset.measured.ndarray\n",

docs/notebooks/analysis/example_fermi_fitting.ipynb

@@ -26,9 +26,9 @@
     "import numpy as np\n",
     "import scipy\n",
     "\n",
-    "import qcodes\n",
+    "import qcodes_loop\n",
     "from qcodes.plots.qcmatplotlib import MatPlot\n",
-    "from qcodes.data.data_array import DataArray\n",
+    "from qcodes_loop.data.data_array import DataArray\n",
     "import matplotlib.pyplot as plt\n",
     "%matplotlib inline\n",
     "\n",

docs/notebooks/analysis/example_lever_arm_charging_energy.ipynb

@@ -34,13 +34,13 @@
    ],
    "source": [
     "%matplotlib inline\n",
-    "import qcodes.tests.legacy.data_mocks\n",
+    "import qcodes_loop.tests.data_mocks\n",
     "from qcodes.plots.qcmatplotlib import MatPlot\n",
     "import numpy as np\n",
     "import qtt\n",
     "from qtt.algorithms.ohmic import fitOhmic\n",
     "\n",
-    "ds = qcodes.tests.legacy.data_mocks.DataSet1D()\n",
+    "ds = qcodes_loop.tests.data_mocks.DataSet1D()\n",
     "x = np.arange(-200, 200)\n",
     "y = 1e-10 * (x + 50 + 20 * np.random.rand(x.size))\n",
     "ds = qtt.data.makeDataSet1Dplain('gate', x, xunit='mV', yname='current', y=y)\n",

docs/notebooks/analysis/example_ohmic.ipynb

@@ -39,8 +39,8 @@
     "import matplotlib.pyplot as plt\n",
     "%matplotlib inline\n",
     "\n",
-    "import qcodes\n",
-    "from qcodes.data.hdf5_format import HDF5Format\n",
+    "import qcodes_loop\n",
+    "from qcodes_loop.data.hdf5_format import HDF5Format\n",
     "import qtt\n",
     "from qtt.algorithms.tunneling import fit_pol_all, polmod_all_2slopes, plot_polarization_fit\n",
     "from qtt.data import load_example_dataset"