Release v0.6 + small fixes (#97)

* Bump v0.6

* rename `gaugefix` -> `fixgauge`

* reduce unnecessary warnings

* fix `copy_input` signatures in Mooncake tests

* Add changelog to docs

Author: lkdvos

Project.toml

@@ -1,7 +1,7 @@
 name = "MatrixAlgebraKit"
 uuid = "6c742aac-3347-4629-af66-fc926824e5e4"
 authors = ["Jutho <[email protected]> and contributors"]
-version = "0.5.0"
+version = "0.6.0"
 
 [deps]
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"

docs/make.jl

@@ -57,6 +57,7 @@ makedocs(;
         ],
         "Developer Interface" => "dev_interface.md",
         "Library" => "library.md",
+        "Changelog" => "changelog.md",
     ],
     checkdocs = :exports,
     doctest = true,

docs/src/changelog.md

@@ -0,0 +1,64 @@
+# Changelog
+
+All notable changes to this project will be documented in this file.
+
+The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
+and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
+
+## Guidelines for updating this changelog
+
+When making changes to this project, please update the "Unreleased" section with your changes under the appropriate category:
+
+- **Added** for new features.
+- **Changed** for changes in existing functionality.
+- **Deprecated** for soon-to-be removed features.
+- **Removed** for now removed features.
+- **Fixed** for any bug fixes.
+- **Security** in case of vulnerabilities.
+
+When releasing a new version, move the "Unreleased" changes to a new version section with the release date.
+
+[Unreleased]: https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/compare/v0.6.0...HEAD
+[0.6.0]: https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/releases/tag/v0.6.0
+
+## [Unreleased]
+
+### Added
+
+### Changed
+
+### Deprecated
+
+### Removed
+
+### Fixed
+
+### Security
+
+## [0.6.0] - 2025-11-14
+
+### Added
+- New `project_isometric` function for projecting matrices onto isometric manifold ([#67](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/67))
+- New `PolarNewton` algorithm for polar decomposition ([#67](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/67))
+- New matrix property functions: `ishermitian`, `isantihermitian`, `hermitianpart!`, `hermitianpart`, `antihermitianpart!`, and `antihermitianpart` ([#64](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/64))
+- Support for `BigFloat` via new `GenericLinearAlgebra` extension ([#87](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/87))
+- Mooncake reverse-mode AD rules ([#85](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/85))
+- GPU support for image and null space computations ([#82](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/82))
+- GPU support for polar decomposition ([#83](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/83))
+- GPU support for new projection operations ([#81](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/81))
+- Output truncation error for truncated decompositions ([#75](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/75))
+- Documentation for truncated decomposition keyword arguments ([#71](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/71))
+- Default algorithm implementations for GPU wrapper array types ([#49](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/49))
+
+### Changed
+
+- Made `gaugefix!` optional ([#95](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/95))
+- Renamed `isisometry` to `isisometric` for consistency with `project_isometric` ([#73](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/73))
+- Refactored `left_orth`, `right_orth`, `left_null` and `right_null` interface ([#79](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/79))
+- Improved GPU support for SVD operations ([#80](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/80))
+- Loosened strictness on hermitian checks ([#78](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/78))
+- Updated pullback tolerances ([#92](https://github.com/QuantumKitHub/MatrixAlgebraKit.jl/pull/92))
+
+### Removed
+
+### Fixed

docs/src/user_interface/decompositions.md

@@ -413,21 +413,21 @@ This preserves the decomposition `A = U * Σ * Vᴴ` while fixing the gauge.
 ### Disabling Gauge Fixing
 
 Gauge fixing is enabled by default for all eigenvalue and singular value decompositions.
-If you prefer to obtain the raw results from the underlying computational routines without gauge fixing, you can disable it using the `gaugefix` keyword argument:
+If you prefer to obtain the raw results from the underlying computational routines without gauge fixing, you can disable it using the `fixgauge` keyword argument:
 
 ```julia
 # With gauge fixing (default)
 D, V = eigh_full(A)
 
 # Without gauge fixing
-D, V = eigh_full(A; gaugefix = false)
+D, V = eigh_full(A; fixgauge = false)
 ```
 
 The same keyword is available for `eig_full`, `eig_trunc`, `svd_full`, `svd_compact`, and `svd_trunc` functions.
-Additionally, the default value can also be controlled with a global toggle using [`MatrixAlgebraKit.default_gaugefix`](@ref).
+Additionally, the default value can also be controlled with a global toggle using [`MatrixAlgebraKit.default_fixgauge`](@ref).
 
 ```@docs; canonical=false
 MatrixAlgebraKit.gaugefix!
-MatrixAlgebraKit.default_gaugefix
+MatrixAlgebraKit.default_fixgauge
 ```
 

ext/MatrixAlgebraKitGenericLinearAlgebraExt.jl

@@ -1,7 +1,7 @@
 module MatrixAlgebraKitGenericLinearAlgebraExt
 
 using MatrixAlgebraKit
-using MatrixAlgebraKit: sign_safe, check_input, diagview, gaugefix!, default_gaugefix
+using MatrixAlgebraKit: sign_safe, check_input, diagview, gaugefix!, default_fixgauge
 using GenericLinearAlgebra: svd!, svdvals!, eigen!, eigvals!, Hermitian, qr!
 using LinearAlgebra: I, Diagonal, lmul!
 
@@ -17,7 +17,7 @@ function MatrixAlgebraKit.svd_compact!(A::AbstractMatrix, USVᴴ, alg::GLA_QRIte
     F = svd!(A)
     U, S, Vᴴ = F.U, Diagonal(F.S), F.Vt
 
-    do_gauge_fix = get(alg.kwargs, :gaugefix, default_gaugefix())::Bool
+    do_gauge_fix = get(alg.kwargs, :fixgauge, default_fixgauge())::Bool
     do_gauge_fix && gaugefix!(svd_compact!, U, Vᴴ)
 
     return U, S, Vᴴ
@@ -29,7 +29,7 @@ function MatrixAlgebraKit.svd_full!(A::AbstractMatrix, USVᴴ, alg::GLA_QRIterat
     S = MatrixAlgebraKit.zero!(similar(F.S, (size(U, 2), size(Vᴴ, 1))))
     diagview(S) .= F.S
 
-    do_gauge_fix = get(alg.kwargs, :gaugefix, default_gaugefix())::Bool
+    do_gauge_fix = get(alg.kwargs, :fixgauge, default_fixgauge())::Bool
     do_gauge_fix && gaugefix!(svd_full!, U, Vᴴ)
 
     return U, S, Vᴴ

src/common/defaults.jl

@@ -43,18 +43,18 @@ Default tolerance for deciding to warn if the provided `A` is not hermitian.
 default_hermitian_tol(A) = eps(norm(A, Inf))^(3 / 4)
 
 
-const DEFAULT_GAUGEFIX = Ref(true)
+const DEFAULT_FIXGAUGE = Ref(true)
 
 @doc """
-    default_gaugefix() -> current_value
-    default_gaugefix(new_value::Bool) -> previous_value
+    default_fixgauge() -> current_value
+    default_fixgauge(new_value::Bool) -> previous_value
 
 Global toggle for enabling or disabling the default behavior of gauge fixing the output of the eigen- and singular value decompositions.
-""" default_gaugefix
+""" default_fixgauge
 
-default_gaugefix() = DEFAULT_GAUGEFIX[]
-function default_gaugefix(new_value::Bool)
-    previous_value = DEFAULT_GAUGEFIX[]
-    DEFAULT_GAUGEFIX[] = new_value
+default_fixgauge() = DEFAULT_FIXGAUGE[]
+function default_fixgauge(new_value::Bool)
+    previous_value = DEFAULT_FIXGAUGE[]
+    DEFAULT_FIXGAUGE[] = new_value
     return previous_value
 end

src/implementations/eig.jl

@@ -82,8 +82,8 @@ function eig_full!(A::AbstractMatrix, DV, alg::LAPACK_EigAlgorithm)
     check_input(eig_full!, A, DV, alg)
     D, V = DV
 
-    do_gauge_fix = get(alg.kwargs, :gaugefix, default_gaugefix())::Bool
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    do_gauge_fix = get(alg.kwargs, :fixgauge, default_fixgauge())::Bool
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa LAPACK_Simple
         isempty(alg_kwargs) ||
@@ -102,7 +102,7 @@ function eig_vals!(A::AbstractMatrix, D, alg::LAPACK_EigAlgorithm)
     check_input(eig_vals!, A, D, alg)
     V = similar(A, complex(eltype(A)), (size(A, 1), 0))
 
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa LAPACK_Simple
         isempty(alg_kwargs) ||
@@ -145,8 +145,8 @@ function eig_full!(A::AbstractMatrix, DV, alg::GPU_EigAlgorithm)
     check_input(eig_full!, A, DV, alg)
     D, V = DV
 
-    do_gauge_fix = get(alg.kwargs, :gaugefix, default_gaugefix())::Bool
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    do_gauge_fix = get(alg.kwargs, :fixgauge, default_fixgauge())::Bool
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa GPU_Simple
         isempty(alg_kwargs) || @warn "invalid keyword arguments for GPU_Simple"
@@ -162,7 +162,7 @@ function eig_vals!(A::AbstractMatrix, D, alg::GPU_EigAlgorithm)
     check_input(eig_vals!, A, D, alg)
     V = similar(A, complex(eltype(A)), (size(A, 1), 0))
 
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa GPU_Simple
         isempty(alg_kwargs) || @warn "invalid keyword arguments for GPU_Simple"

src/implementations/eigh.jl

@@ -92,8 +92,8 @@ function eigh_full!(A::AbstractMatrix, DV, alg::LAPACK_EighAlgorithm)
     D, V = DV
     Dd = D.diag
 
-    do_gauge_fix = get(alg.kwargs, :gaugefix, default_gaugefix())::Bool
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    do_gauge_fix = get(alg.kwargs, :fixgauge, default_fixgauge())::Bool
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa LAPACK_MultipleRelativelyRobustRepresentations
         YALAPACK.heevr!(A, Dd, V; alg_kwargs...)
@@ -114,7 +114,7 @@ function eigh_vals!(A::AbstractMatrix, D, alg::LAPACK_EighAlgorithm)
     check_input(eigh_vals!, A, D, alg)
     V = similar(A, (size(A, 1), 0))
 
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa LAPACK_MultipleRelativelyRobustRepresentations
         YALAPACK.heevr!(A, D, V; alg_kwargs...)
@@ -168,8 +168,8 @@ function eigh_full!(A::AbstractMatrix, DV, alg::GPU_EighAlgorithm)
     D, V = DV
     Dd = D.diag
 
-    do_gauge_fix = get(alg.kwargs, :gaugefix, default_gaugefix())::Bool
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    do_gauge_fix = get(alg.kwargs, :fixgauge, default_fixgauge())::Bool
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa GPU_Jacobi
         _gpu_heevj!(A, Dd, V; alg_kwargs...)
@@ -192,7 +192,7 @@ function eigh_vals!(A::AbstractMatrix, D, alg::GPU_EighAlgorithm)
     check_input(eigh_vals!, A, D, alg)
     V = similar(A, (size(A, 1), 0))
 
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa GPU_Jacobi
         _gpu_heevj!(A, D, V; alg_kwargs...)

src/implementations/gen_eig.jl

@@ -58,8 +58,8 @@ function gen_eig_full!(A::AbstractMatrix, B::AbstractMatrix, WV, alg::LAPACK_Eig
     check_input(gen_eig_full!, A, B, WV, alg)
     W, V = WV
 
-    do_gauge_fix = get(alg.kwargs, :gaugefix, default_gaugefix())::Bool
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    do_gauge_fix = get(alg.kwargs, :fixgauge, default_fixgauge())::Bool
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa LAPACK_Simple
         isempty(alg_kwargs) ||
@@ -78,7 +78,7 @@ function gen_eig_vals!(A::AbstractMatrix, B::AbstractMatrix, W, alg::LAPACK_EigA
     check_input(gen_eig_vals!, A, B, W, alg)
     V = similar(A, complex(eltype(A)), (size(A, 1), 0))
 
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa LAPACK_Simple
         isempty(alg_kwargs) ||

src/implementations/svd.jl

@@ -120,8 +120,8 @@ function svd_full!(A::AbstractMatrix, USVᴴ, alg::LAPACK_SVDAlgorithm)
         return USVᴴ
     end
 
-    do_gauge_fix = get(alg.kwargs, :gaugefix, default_gaugefix())::Bool
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    do_gauge_fix = get(alg.kwargs, :fixgauge, default_fixgauge())::Bool
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa LAPACK_QRIteration
         isempty(alg_kwargs) ||
@@ -153,8 +153,8 @@ function svd_compact!(A::AbstractMatrix, USVᴴ, alg::LAPACK_SVDAlgorithm)
     check_input(svd_compact!, A, USVᴴ, alg)
     U, S, Vᴴ = USVᴴ
 
-    do_gauge_fix = get(alg.kwargs, :gaugefix, default_gaugefix())::Bool
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    do_gauge_fix = get(alg.kwargs, :fixgauge, default_fixgauge())::Bool
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa LAPACK_QRIteration
         isempty(alg_kwargs) ||
@@ -183,7 +183,7 @@ function svd_vals!(A::AbstractMatrix, S, alg::LAPACK_SVDAlgorithm)
     check_input(svd_vals!, A, S, alg)
     U, Vᴴ = similar(A, (0, 0)), similar(A, (0, 0))
 
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa LAPACK_QRIteration
         isempty(alg_kwargs) ||
@@ -336,8 +336,8 @@ function svd_full!(A::AbstractMatrix, USVᴴ, alg::GPU_SVDAlgorithm)
         return USVᴴ
     end
 
-    do_gauge_fix = get(alg.kwargs, :gaugefix, default_gaugefix())::Bool
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    do_gauge_fix = get(alg.kwargs, :fixgauge, default_fixgauge())::Bool
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa GPU_QRIteration
         isempty(alg_kwargs) || @warn "invalid keyword arguments for GPU_QRIteration"
@@ -368,7 +368,7 @@ function svd_trunc!(A::AbstractMatrix, USVᴴ, alg::TruncatedAlgorithm{<:GPU_Ran
     # normal `truncation_error!` does not work here since `S` is not the full singular value spectrum
     ϵ = sqrt(norm(A)^2 - norm(diagview(Str))^2) # is there a more accurate way to do this?
 
-    do_gauge_fix = get(alg.alg.kwargs, :gaugefix, default_gaugefix())::Bool
+    do_gauge_fix = get(alg.alg.kwargs, :fixgauge, default_fixgauge())::Bool
     do_gauge_fix && gaugefix!(svd_trunc!, Utr, Vᴴtr)
 
     return Utr, Str, Vᴴtr, ϵ
@@ -378,8 +378,8 @@ function svd_compact!(A::AbstractMatrix, USVᴴ, alg::GPU_SVDAlgorithm)
     check_input(svd_compact!, A, USVᴴ, alg)
     U, S, Vᴴ = USVᴴ
 
-    do_gauge_fix = get(alg.kwargs, :gaugefix, default_gaugefix())::Bool
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    do_gauge_fix = get(alg.kwargs, :fixgauge, default_fixgauge())::Bool
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa GPU_QRIteration
         isempty(alg_kwargs) || @warn "invalid keyword arguments for GPU_QRIteration"
@@ -403,7 +403,7 @@ function svd_vals!(A::AbstractMatrix, S, alg::GPU_SVDAlgorithm)
     check_input(svd_vals!, A, S, alg)
     U, Vᴴ = similar(A, (0, 0)), similar(A, (0, 0))
 
-    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:gaugefix,)})
+    alg_kwargs = Base.structdiff(alg.kwargs, NamedTuple{(:fixgauge,)})
 
     if alg isa GPU_QRIteration
         isempty(alg_kwargs) || @warn "invalid keyword arguments for GPU_QRIteration"