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removed local neighborhood files
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+7
-300
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18 files changed

+7
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.github/workflows/build-containers.yml

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- master
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jobs:
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build-and-remove-LN:
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uses: "./.github/workflows/build-and-remove-template.yml"
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with:
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path: docker-wrappers/LocalNeighborhood
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container: ade0brien/local-neighborhood
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build-and-remove-omics1:
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uses: "./.github/workflows/build-and-remove-template.yml"
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with:

config/config.yaml

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# careful: too many parameters might make your runs take a long time.
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algorithms:
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- name: "localneighborhood"
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params:
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include: false
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- name: "strwr"
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params:
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include: false

docker-wrappers/LocalNeighborhood/Dockerfile

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docker-wrappers/LocalNeighborhood/README.md

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docker-wrappers/LocalNeighborhood/local_neighborhood.py

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docker-wrappers/LocalNeighborhood/testoutput.txt

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docs/prms/prms.rst

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:caption: PathLinker
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pathlinker
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.. toctree::
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:maxdepth: 1
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:caption: Local Neighborhood
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localn

spras/local_neighborhood.py

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spras/runner.py

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from spras.omicsintegrator1 import OmicsIntegrator1 as omicsintegrator1
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from spras.omicsintegrator2 import OmicsIntegrator2 as omicsintegrator2
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from spras.pathlinker import PathLinker as pathlinker
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from spras.local_neighborhood import LocalNeighborhood as localneighborhood
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from spras.strwr import ST_RWR as strwr
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from spras.rwr import RWR as rwr
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test/LocalNeighborhood/__init__.py

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