GIMP/DESCRIPTION at main · SAADAT-Abu/GIMP · GitHub

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Package: GIMP
Title: Genomic Imprinting Methylation Patterns
Version: 0.2.0
Authors@R: c(
    person(given = "Abu", family = "Saadat", role = c("cre", "aut"),
           email = "saadatabu1996@gmail.com"),
    person(given = "Francesco", family = "Cecere", role = "aut",
           email = "francesco.cecerengs@gmail.com"))
Description: A package for analyzing Imprinting Control Regions (ICRs) DNA methylation.
    Supports both processed methylation data and raw IDAT files from Illumina arrays.
    Provides specialized tools for imprinting analysis including defect detection
    and interactive visualizations.
License: GPL-3
Encoding: UTF-8
URL: https://github.com/SAADAT-Abu/GIMP
BugReports: https://github.com/SAADAT-Abu/GIMP/issues
LazyData: false
LazyDataCompression: xz
RoxygenNote: 7.3.3
Depends: R (>= 4.4.0)
Imports: shiny, shinydashboard, DT, plotly, minfi,
        IlluminaHumanMethylation450kanno.ilmn12.hg19,
        IlluminaHumanMethylationEPICanno.ilm10b4.hg19,
        IlluminaHumanMethylationEPICv2anno.20a1.hg38,
        IlluminaHumanMethylationEPICmanifest,
        IlluminaHumanMethylation450kmanifest,
        IlluminaHumanMethylationEPICv2manifest, tools,
        utils, stats, valr, reshape2, ggplot2, pheatmap,
        viridisLite, ggplotify, readr, BiocManager,
        R.utils, Biobase, GEOquery, limma, tibble, dplyr, tidyr,
        BiocParallel, readxl, doParallel
Suggests: knitr, rmarkdown, testthat, AnnotationHub
VignetteBuilder: knitr
biocViews: DNAMethylation, Microarray, Preprocessing, QualityControl,
        DifferentialMethylation, Epigenetics, MethylationArray
NeedsCompilation: no
Packaged: 2025-06-23 12:38:32 UTC; saadat