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docs/src/introduction_to_catalyst/introduction_to_catalyst.md

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@@ -85,13 +85,10 @@ Catalyst also has functionality for visualizing networks using the [Makie](https
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plotting ecosystem. The relevant packages to load are Catalyst, GraphMakie, and a Makie backend
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such as GLMakie. Doing so and then using the `plot_network` function allows us to
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visualize the network:
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```julia
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```@example tut1
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using Catalyst, GraphMakie, GLMakie
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g = plot_network(rn)
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```
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giving
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![Repressilator solution](../assets/repressilator_graph_makie.png)
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The network graph shows a variety of information, representing each species as a
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blue node, and each reaction as an orange dot. Black arrows from species to

docs/src/model_creation/network_analysis.md

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@@ -31,11 +31,10 @@ In the [Introduction to Catalyst](@ref introduction_to_catalyst)
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tutorial we showed how the above network could be visualized as a
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species-reaction graph. There, species are represented by the nodes of the graph
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and edges show the reactions in which a given species is a substrate or product.
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```julia
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```@example s1
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using Catalyst, GraphMakie, GLMakie
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g = plot_network(repressilator)
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```
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![Repressilator solution](../assets/repressilator_graph_makie.png)
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We also showed in the [Introduction to Catalyst](@ref introduction_to_catalyst) tutorial that
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the reaction rate equation ODE model for the repressilator is

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