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326 | 326 | @test Catalyst.iscomplexbalanced(rn, rates) == true
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327 | 327 | end
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328 | 328 |
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| 329 | +### STRONG LINKAGE CLASS TESTS |
| 330 | + |
| 331 | +let |
| 332 | + rn = @reaction_network begin |
| 333 | + (k1, k2), A <--> B + C |
| 334 | + k3, B + C --> D |
| 335 | + k4, D --> E |
| 336 | + (k5, k6), E <--> 2F |
| 337 | + k7, 2F --> D |
| 338 | + (k8, k9), D + E <--> G |
| 339 | + end |
| 340 | + |
| 341 | + rcs, D = reactioncomplexes(rn) |
| 342 | + slcs = stronglinkageclasses(rn) |
| 343 | + tslcs = terminallinkageclasses(rn) |
| 344 | + @test length(slcs) == 3 |
| 345 | + @test length(tslcs) == 2 |
| 346 | + @test issubset([[1,2], [3,4,5], [6,7]], slcs) |
| 347 | + @test issubset([[3,4,5], [6,7]], tslcs) |
| 348 | +end |
| 349 | + |
| 350 | +let |
| 351 | + rn = @reaction_network begin |
| 352 | + (k1, k2), A <--> B + C |
| 353 | + k3, B + C --> D |
| 354 | + k4, D --> E |
| 355 | + (k5, k6), E <--> 2F |
| 356 | + k7, 2F --> D |
| 357 | + (k8, k9), D + E --> G |
| 358 | + end |
| 359 | + |
| 360 | + rcs, D = reactioncomplexes(rn) |
| 361 | + slcs = stronglinkageclasses(rn) |
| 362 | + tslcs = terminallinkageclasses(rn) |
| 363 | + @test length(slcs) == 4 |
| 364 | + @test length(tslcs) == 2 |
| 365 | + @test issubset([[1,2], [3,4,5], [6], [7]], slcs) |
| 366 | + @test issubset([[3,4,5], [7]], tslcs) |
| 367 | +end |
| 368 | + |
| 369 | +let |
| 370 | + rn = @reaction_network begin |
| 371 | + (k1, k2), A <--> B + C |
| 372 | + (k3, k4), B + C <--> D |
| 373 | + k5, D --> E |
| 374 | + (k6, k7), E <--> 2F |
| 375 | + k8, 2F --> D |
| 376 | + (k9, k10), D + E <--> G |
| 377 | + end |
| 378 | + |
| 379 | + rcs, D = reactioncomplexes(rn) |
| 380 | + slcs = stronglinkageclasses(rn) |
| 381 | + tslcs = terminallinkageclasses(rn) |
| 382 | + @test length(slcs) == 2 |
| 383 | + @test length(tslcs) == 2 |
| 384 | + @test issubset([[1,2,3,4,5], [6,7]], slcs) |
| 385 | + @test issubset([[1,2,3,4,5], [6,7]], tslcs) |
| 386 | +end |
| 387 | + |
| 388 | +let |
| 389 | + rn = @reaction_network begin |
| 390 | + (k1, k2), A <--> 2B |
| 391 | + k3, A --> C + D |
| 392 | + (k4, k5), C + D <--> E |
| 393 | + k6, 2B --> F |
| 394 | + (k7, k8), F <--> 2G |
| 395 | + (k9, k10), 2G <--> H |
| 396 | + k11, H --> F |
| 397 | + end |
| 398 | + |
| 399 | + rcs, D = reactioncomplexes(rn) |
| 400 | + slcs = stronglinkageclasses(rn) |
| 401 | + tslcs = terminallinkageclasses(rn) |
| 402 | + @test length(slcs) == 3 |
| 403 | + @test length(tslcs) == 2 |
| 404 | + @test issubset([[1,2], [3,4], [5,6,7]], slcs) |
| 405 | + @test issubset([[3,4], [5,6,7]], tslcs) |
| 406 | +end |
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