Merge branch 'master' into patch-1

Author: ChrisRackauckas

.github/dependabot.yml

@@ -0,0 +1,7 @@
+# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates
+version: 2
+updates:
+  - package-ecosystem: "github-actions"
+    directory: "/" # Location of package manifests
+    schedule:
+      interval: "weekly"

.github/workflows/CI.yml

@@ -19,11 +19,11 @@ jobs:
           - '1'
           - '1.6'
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
       - uses: julia-actions/setup-julia@v1
         with:
           version: ${{ matrix.version }}
-      - uses: actions/cache@v1
+      - uses: actions/cache@v3
         env:
           cache-name: cache-artifacts
         with:
@@ -40,6 +40,6 @@ jobs:
       - uses: julia-actions/julia-processcoverage@v1
         with:
           directories: src, ext
-      - uses: codecov/codecov-action@v1
+      - uses: codecov/codecov-action@v3
         with:
           file: lcov.info

.github/workflows/Downstream.yml

@@ -37,16 +37,18 @@ jobs:
           - {user: SciML, repo: StochasticDiffEq.jl, group: AlgConvergence}
           - {user: SciML, repo: Sundials.jl, group: All}
           - {user: SciML, repo: SteadyStateDiffEq.jl, group: All}
+          - {user: SciML, repo: DifferentialEquations.jl, group: All}
+          - {user: SciML, repo: ModelingToolkit.jl, group: All}
 
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
       - uses: julia-actions/setup-julia@v1
         with:
           version: ${{ matrix.julia-version }}
           arch: x64
       - uses: julia-actions/julia-buildpkg@latest
       - name: Clone Downstream
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4
         with:
           repository: ${{ matrix.package.user }}/${{ matrix.package.repo }}
           path: downstream
@@ -68,6 +70,6 @@ jobs:
             exit(0)  # Exit immediately, as a success
           end
       - uses: julia-actions/julia-processcoverage@v1
-      - uses: codecov/codecov-action@v1
+      - uses: codecov/codecov-action@v3
         with:
           file: lcov.info

.github/workflows/FormatCheck.yml

@@ -21,7 +21,7 @@ jobs:
         with:
           version: ${{ matrix.julia-version }}
 
-      - uses: actions/checkout@v1
+      - uses: actions/checkout@v4
       - name: Install JuliaFormatter and format
         # This will use the latest version by default but you can set the version like so:
         #

.github/workflows/Invalidations.yml

@@ -19,12 +19,12 @@ jobs:
     - uses: julia-actions/setup-julia@v1
       with:
         version: '1'
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
     - uses: julia-actions/julia-buildpkg@v1
     - uses: julia-actions/julia-invalidations@v1
       id: invs_pr
 
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         ref: ${{ github.event.repository.default_branch }}
     - uses: julia-actions/julia-buildpkg@v1

.gitignore

@@ -4,3 +4,4 @@
 *.jl.*.mem
 Manifest.toml
 .DS_Store
+.vscode

Project.toml

@@ -1,83 +1,93 @@
 name = "DiffEqBase"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
 authors = ["Chris Rackauckas <[email protected]>"]
-version = "6.115.3"
+version = "6.130.0"
 
 [deps]
-ArrayInterfaceCore = "30b0a656-2188-435a-8636-2ec0e6a096e2"
+ArrayInterface = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9"
 ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
 DataStructures = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
 Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
 DocStringExtensions = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
+EnumX = "4e289a0a-7415-4d19-859d-a7e5c4648b56"
 FastBroadcast = "7034ab61-46d4-4ed7-9d0f-46aef9175898"
 ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
 FunctionWrappers = "069b7b12-0de2-55c6-9aab-29f3d0a68a2e"
 FunctionWrappersWrappers = "77dc65aa-8811-40c2-897b-53d922fa7daf"
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 Logging = "56ddb016-857b-54e1-b83d-db4d58db5568"
+Markdown = "d6f4376e-aef5-505a-96c1-9c027394607a"
 MuladdMacro = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221"
 Parameters = "d96e819e-fc66-5662-9728-84c9c7592b0a"
 PreallocationTools = "d236fae5-4411-538c-8e31-a6e3d9e00b46"
+PrecompileTools = "aea7be01-6a6a-4083-8856-8a6e6704d82a"
 Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
 RecursiveArrayTools = "731186ca-8d62-57ce-b412-fbd966d074cd"
 Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
 Requires = "ae029012-a4dd-5104-9daa-d747884805df"
 SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
+SciMLOperators = "c0aeaf25-5076-4817-a8d5-81caf7dfa961"
 Setfield = "efcf1570-3423-57d1-acb7-fd33fddbac46"
 SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
 Static = "aedffcd0-7271-4cad-89d0-dc628f76c6d3"
-StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
+StaticArraysCore = "1e83bf80-4336-4d27-bf5d-d5a4f845583c"
 Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 Tricks = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775"
+TruncatedStacktraces = "781d530d-4396-4725-bb49-402e4bee1e77"
 ZygoteRules = "700de1a5-db45-46bc-99cf-38207098b444"
 
 [weakdeps]
 Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
 GeneralizedGenerated = "6b9d7cbe-bcb9-11e9-073f-15a7a543e2eb"
-Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7"
 MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195"
+Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7"
 MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca"
 ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267"
 Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"
 Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d"
 Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 
 [extensions]
-DiffEqBaseZygoteExt = "Zygote"
-DiffEqBaseReverseDiffExt = "ReverseDiff"
-DiffEqBaseTrackerExt = "Tracker"
 DiffEqBaseDistributionsExt = "Distributions"
+DiffEqBaseGeneralizedGeneratedExt = "GeneralizedGenerated"
+DiffEqBaseMPIExt = "MPI"
 DiffEqBaseMeasurementsExt = "Measurements"
 DiffEqBaseMonteCarloMeasurementsExt = "MonteCarloMeasurements"
-DiffEqBaseGeneralizedGeneratedExt = "GeneralizedGenerated"
+DiffEqBaseReverseDiffExt = "ReverseDiff"
+DiffEqBaseTrackerExt = "Tracker"
 DiffEqBaseUnitfulExt = "Unitful"
-DiffEqBaseMPIExt = "MPI"
+DiffEqBaseZygoteExt = "Zygote"
 
 [compat]
-ArrayInterfaceCore = "0.1.26"
+ArrayInterface = "7"
 ChainRulesCore = "1"
 DataStructures = "0.18"
 Distributions = "0.25"
 DocStringExtensions = "0.9"
+EnumX = "1"
 FastBroadcast = "0.2"
 ForwardDiff = "0.10"
 FunctionWrappers = "1.0"
 FunctionWrappersWrappers = "0.1"
 MuladdMacro = "0.2.1"
 Parameters = "0.12.0"
 PreallocationTools = "0.4"
+PrecompileTools = "1"
 RecursiveArrayTools = "2"
 Reexport = "1.0"
 Requires = "1.0"
-SciMLBase = "1.84"
+SciMLBase = "1.93.3"
+SciMLOperators = "0.2, 0.3"
 Setfield = "0.8, 1"
 Static = "0.7, 0.8"
-StaticArrays = "1.0"
+StaticArraysCore = "1.4"
 Tricks = "0.1.6"
+TruncatedStacktraces = "1"
 ZygoteRules = "0.2"
 julia = "1.6"
 
 [extras]
+Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
 Distributed = "8ba89e20-285c-5b6f-9357-94700520ee1b"
 Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
 ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
@@ -91,11 +101,12 @@ Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
 Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
 ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267"
 SafeTestsets = "1bc83da4-3b8d-516f-aca4-4fe02f6d838f"
+StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
 Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"
 Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d"
 Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"
 
 [targets]
-test = ["Distributed", "GeneralizedGenerated", "Measurements", "MonteCarloMeasurements", "Unitful", "LabelledArrays", "ForwardDiff", "InteractiveUtils", "Plots", "Pkg", "Random", "SafeTestsets", "Statistics", "Test", "Distributions"]
+test = ["Distributed", "GeneralizedGenerated", "Measurements", "MonteCarloMeasurements", "Unitful", "LabelledArrays", "ForwardDiff", "InteractiveUtils", "Plots", "Pkg", "Random", "StaticArrays", "SafeTestsets", "Statistics", "Test", "Distributions", "Aqua"]

ext/DiffEqBaseGeneralizedGeneratedExt.jl

@@ -1,8 +1,12 @@
 module DiffEqBaseGeneralizedGeneratedExt
 
-using DiffEqBase
-isdefined(Base, :get_extension) ? (using GeneralizedGenerated) :
-(using ..GeneralizedGenerated)
+if isdefined(Base, :get_extension)
+    using DiffEqBase
+    using GeneralizedGenerated
+else
+    using ..DiffEqBase
+    using ..GeneralizedGenerated
+end
 
 function SciMLBase.numargs(::GeneralizedGenerated.RuntimeFn{Args}) where {Args}
     GeneralizedGenerated.from_type(Args) |> length

ext/DiffEqBaseMPIExt.jl

@@ -1,11 +1,16 @@
 module DiffEqBaseMPIExt
 
-import DiffEqBase
-isdefined(Base, :get_extension) ? (import MPI) : (import ..MPI)
+if isdefined(Base, :get_extension)
+    using DiffEqBase
+    import MPI
+else
+    using ..DiffEqBase
+    import ..MPI
+end
 
 if isdefined(MPI, :AbstractMultiRequest)
     function DiffEqBase.anyeltypedual(::Type{T},
-                                      counter = 0) where {T <: MPI.AbstractMultiRequest}
+        counter = 0) where {T <: MPI.AbstractMultiRequest}
         Any
     end
 end

ext/DiffEqBaseMeasurementsExt.jl

@@ -1,11 +1,17 @@
 module DiffEqBaseMeasurementsExt
 
-using DiffEqBase
-import DiffEqBase: value
-isdefined(Base, :get_extension) ? (using Measurements) : (using ..Measurements)
+if isdefined(Base, :get_extension)
+    using DiffEqBase
+    import DiffEqBase: value
+    using Measurements
+else
+    using ..DiffEqBase
+    import ..DiffEqBase: value
+    using ..Measurements
+end
 
 function DiffEqBase.promote_u0(u0::AbstractArray{<:Measurements.Measurement},
-                               p::AbstractArray{<:Measurements.Measurement}, t0)
+    p::AbstractArray{<:Measurements.Measurement}, t0)
     u0
 end
 DiffEqBase.promote_u0(u0, p::AbstractArray{<:Measurements.Measurement}, t0) = eltype(p).(u0)
@@ -16,16 +22,18 @@ value(x::Measurements.Measurement) = Measurements.value(x)
 @inline DiffEqBase.fastpow(x::Measurements.Measurement, y::Measurements.Measurement) = x^y
 
 # Support adaptive steps should be errorless
-@inline function DiffEqBase.ODE_DEFAULT_NORM(u::AbstractArray{<:Measurements.Measurement, N
-                                                              },
-                                             t) where {N}
+@inline function DiffEqBase.ODE_DEFAULT_NORM(u::AbstractArray{
+        <:Measurements.Measurement,
+        N,
+    },
+    t) where {N}
     sqrt(sum(x -> DiffEqBase.ODE_DEFAULT_NORM(x[1], x[2]),
-             zip((value(x) for x in u), Iterators.repeated(t))) / length(u))
+        zip((value(x) for x in u), Iterators.repeated(t))) / length(u))
 end
 @inline function DiffEqBase.ODE_DEFAULT_NORM(u::Array{<:Measurements.Measurement, N},
-                                             t) where {N}
+    t) where {N}
     sqrt(sum(x -> DiffEqBase.ODE_DEFAULT_NORM(x[1], x[2]),
-             zip((value(x) for x in u), Iterators.repeated(t))) / length(u))
+        zip((value(x) for x in u), Iterators.repeated(t))) / length(u))
 end
 @inline function DiffEqBase.ODE_DEFAULT_NORM(u::Measurements.Measurement, t)
     abs(Measurements.value(u))