@@ -22,8 +22,8 @@ rate₁ = β * S * I
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rate₂ = γ * I + t
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affect₁ = [S ~ S - 1, I ~ I + 1]
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affect₂ = [I ~ I - 1, R ~ R + 1]
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- j₁ = ConstantRateJump(rate₁, affect₁)
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- j₂ = VariableRateJump(rate₂, affect₂)
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+ j₁ = ModelingToolkit. ConstantRateJump(rate₁, affect₁)
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+ j₂ = ModelingToolkit. VariableRateJump(rate₂, affect₂)
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# create a JumpSystem using these jumps
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@named jumpsys = JumpSystem([j₁, j₂], t, [S, I, R], [β, γ])
@@ -66,8 +66,8 @@ Example:
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Continuing the example started in [`equation_dependencies`](@ref)
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```julia
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- digr = asgraph(equation_dependencies(odesys ),
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- Dict(s => i for (i, s) in enumerate(states(odesys ))))
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+ digr = asgraph(equation_dependencies(jumpsys ),
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+ Dict(s => i for (i, s) in enumerate(states(jumpsys ))))
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```
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"""
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function asgraph (eqdeps, vtois)
@@ -109,7 +109,7 @@ Example:
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Continuing the example started in [`equation_dependencies`](@ref)
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```julia
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- digr = asgraph(odesys )
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+ digr = asgraph(jumpsys )
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```
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"""
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function asgraph (sys:: AbstractSystem ; variables = states (sys),
@@ -136,7 +136,7 @@ Example:
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Continuing the example of [`equation_dependencies`](@ref)
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```julia
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- variable_dependencies(odesys )
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+ variable_dependencies(jumpsys )
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```
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"""
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function variable_dependencies (sys:: AbstractSystem ; variables = states (sys),
@@ -188,7 +188,7 @@ Example:
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Continuing the example in [`asgraph`](@ref)
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```julia
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- dg = asdigraph(digr)
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+ dg = asdigraph(digr, jumpsys )
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```
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"""
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function asdigraph (g:: BipartiteGraph , sys:: AbstractSystem ; variables = states (sys),
@@ -230,7 +230,7 @@ Example:
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Continuing the example of `equation_dependencies`
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```julia
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- eqeqdep = eqeq_dependencies(asgraph(odesys ), variable_dependencies(odesys ))
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+ eqeqdep = eqeq_dependencies(asgraph(jumpsys ), variable_dependencies(jumpsys ))
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```
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"""
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function eqeq_dependencies (eqdeps:: BipartiteGraph{T} ,
@@ -269,7 +269,7 @@ Example:
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Continuing the example of `equation_dependencies`
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```julia
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- varvardep = varvar_dependencies(asgraph(odesys ), variable_dependencies(odesys ))
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+ varvardep = varvar_dependencies(asgraph(jumpsys ), variable_dependencies(jumpsys ))
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```
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"""
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function varvar_dependencies (eqdeps:: BipartiteGraph{T} ,
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