Updates

Author: ParamThakkar123

benchmarks/ParameterEstimation/FitzHughNagumoParameterEstimation.jmd

@@ -53,7 +53,7 @@ prob_short = ODEProblem(fitz, r0, tspan2,p)
 dt = 30.0/3000
 tf = 30.0
 tinterval = 0:dt:tf
-t  = collect(tinterval)
+time_points  = collect(tinterval)
 ```
 
 ```julia
@@ -69,7 +69,7 @@ t_short = collect(tinterval_short)
 #Generate Data
 data_sol_short = solve(prob_short,Vern9(),saveat=t_short,reltol=1e-9,abstol=1e-9)
 data_short = convert(Array, data_sol_short) # This operation produces column major dataset obs as columns, equations as rows
-data_sol = solve(prob,Vern9(),saveat=t,reltol=1e-9,abstol=1e-9)
+data_sol = solve(prob,Vern9(),saveat=time_points,reltol=1e-9,abstol=1e-9)
 data = convert(Array, data_sol)
 ```
 

benchmarks/ParameterEstimation/LorenzParameterEstimation.jmd

@@ -57,7 +57,7 @@ prob_short = ODEProblem(g1, r0, tspan2,p)
 dt = 30.0/3000
 tf = 30.0
 tinterval = 0:dt:tf
-t  = collect(tinterval)
+time_points  = collect(tinterval)
 ```
 
 ```julia
@@ -73,7 +73,7 @@ t_short = collect(tinterval_short)
 # Generate Data
 data_sol_short = solve(prob_short,Vern9(),saveat=t_short,reltol=1e-9,abstol=1e-9)
 data_short = convert(Array, data_sol_short) # This operation produces column major dataset obs as columns, equations as rows
-data_sol = solve(prob,Vern9(),saveat=t,reltol=1e-9,abstol=1e-9)
+data_sol = solve(prob,Vern9(),saveat=time_points,reltol=1e-9,abstol=1e-9)
 data = convert(Array, data_sol)
 ```
 

benchmarks/ParameterEstimation/LotkaVolterraParameterEstimation.jmd

@@ -54,7 +54,7 @@ prob_short = ODEProblem(f, u0, tspan2,p)
 dt = 30.0/3000
 tf = 30.0
 tinterval = 0:dt:tf
-t  = collect(tinterval)
+time_points  = collect(tinterval)
 ```
 
 ```julia
@@ -70,7 +70,7 @@ t_short = collect(tinterval_short)
 #Generate Data
 data_sol_short = solve(prob_short,Tsit5(),saveat=t_short,reltol=1e-9,abstol=1e-9)
 data_short = convert(Array, data_sol_short)
-data_sol = solve(prob,Tsit5(),saveat=t,reltol=1e-9,abstol=1e-9)
+data_sol = solve(prob,Tsit5(),saveat=time_points,reltol=1e-9,abstol=1e-9)
 data = convert(Array, data_sol)
 ```