Merge branch 'master' into compathelper/new_version/2023-08-31-00-30-50-090-02054122287

Author: ChrisRackauckas

.buildkite/build_benchmark.sh

@@ -2,8 +2,20 @@
 
 set -euo pipefail
 
+JULIAHUBREGISTRY_BENCHMARK_TARGETS=(benchmarks/ModelingToolkit/)
+OPENMODELICA_BENCHMARK_TARGETS=(benchmarks/ModelingToolkit/)
+
+if [[ "${JULIAHUBREGISTRY_BENCHMARK_TARGETS[*]}" =~ "${1}" ]]; then
+	echo "--- :julia: Adding JuliaHubRegistry"
+
+	export JULIA_PKG_SERVER="juliahub.com"
+	mkdir -p "${JULIA_DEPOT_PATH}/servers/${JULIA_PKG_SERVER}"
+	cp .buildkite/secrets/token.toml "${JULIA_DEPOT_PATH}/servers/${JULIA_PKG_SERVER}/auth.toml"
+	julia -e 'using Pkg; Pkg.Registry.add(); Pkg.Registry.status()'
+fi
+
 # Instantiate, to install the overall project dependencies, and `build()` for conda
-echo "--- Instantiate"
+echo "--- :julia: Instantiate"
 julia --project=. -e 'using Pkg; Pkg.instantiate(); Pkg.build()'
 
 if [[ "${1}" == *BayesianInference* ]]; then
@@ -17,6 +29,6 @@ if [[ "${1}" == *BayesianInference* ]]; then
 fi
 
 # Run benchmark
-echo "+++ Run benchmark for ${1}"
+echo "+++ :julia: Run benchmark for ${1}"
 julia --threads=auto --project=. benchmark.jl "${1}"
 

.buildkite/launch_benchmarks.yml

@@ -3,7 +3,7 @@ agents:
   sandbox_capable: true
 
 steps:
-  - label: ":runner: Dynamically launch run_tutorial.yml"
+  - label: ":runner: Dynamically launch run_benchmark.yml"
     branches: "!gh-pages"
     env:
       BUILDKITE_PLUGIN_CRYPTIC_BASE64_SIGNED_JOB_ID_SECRET: ${BUILDKITE_PLUGIN_CRYPTIC_BASE64_SIGNED_JOB_ID_SECRET?}

.buildkite/launch_benchmarks.yml.signature

@@ -1 +1 @@
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.buildkite/run_benchmark.yml

@@ -14,11 +14,15 @@ steps:
             - BUILDKITE_S3_ACCESS_KEY_ID="U2FsdGVkX1+x3xs1ZRRZRt3FmwFQmYYKnpV7o8xKkX5Ib6y0o5fv0+rskVAj+JKu"
             - BUILDKITE_S3_SECRET_ACCESS_KEY="U2FsdGVkX1+LWh1yX7LsMBlecEJLc08eJrgOhurhd47CY1/jS3wCGVCQmS1t6f2j70spBoFdfc9kn2naj8HH5A==" 
             - BUILDKITE_S3_DEFAULT_REGION="U2FsdGVkX18ccoE9FmtkwsCm1x0MLMBlN/FLcAyKkY4="
+          files:
+            - .buildkite/secrets/token.toml
       - JuliaCI/julia#v1:
-          version: 1.9
+          version: "1.10"
       - staticfloat/sandbox:
-          rootfs_url: "https://github.com/ven-k/Placeholder/releases/download/v0.23.0/aws_uploader.x86_64.tar.gz"
-          rootfs_treehash: "d46b35aa927024de8729d63fde18442a0a590e62"
+          rootfs_url: "https://github.com/thazhemadam/openmodelica-rootfs-image/releases/download/v1.23.0/rootfs-openmodelica-v1.23.0.amd64.tar.gz"
+          rootfs_treehash: "82970243dc4f188e599a976abc20951f4aba2912"
+          uid: 1000
+          gid: 1000
           workspaces:
             # Include the julia we just downloaded
             - "/cache/julia-buildkite-plugin:/cache/julia-buildkite-plugin"
@@ -34,6 +38,8 @@ steps:
             #- html/**/*.html
             - markdown/**/figures/*.png
             - markdown/**/*.md
+            - markdown/**/*.pdf
+            - markdown/**/*.svg
             - notebook/**/*.ipynb
             - pdf/**/*.pdf
             - script/**/*.jl

.buildkite/secrets/.gitignore

@@ -0,0 +1 @@
+token.toml

.buildkite/secrets/token.toml.encrypted

@@ -19,3 +19,4 @@ steps:
     agents:
       queue: "juliaecosystem"
       arch: "x86_64"
+      os: "linux"

.buildkite/test_sciml.yml

@@ -5,3 +5,6 @@ updates:
     directory: "/" # Location of package manifests
     schedule:
       interval: "weekly"
+    ignore:
+      - dependency-name: "crate-ci/typos"
+        update-types: ["version-update:semver-patch", "version-update:semver-minor"]

.github/dependabot.yml

@@ -10,7 +10,7 @@ jobs:
   build:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - name: Pkg.add("CompatHelper")
         run: julia -e 'using Pkg; Pkg.add("CompatHelper")'
       - name: CompatHelper.main()

.github/workflows/CompatHelper.yml

@@ -0,0 +1,13 @@
+name: Spell Check
+
+on: [pull_request]
+
+jobs:
+  typos-check:
+    name: Spell Check with Typos
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout Actions Repository
+        uses: actions/checkout@v4
+      - name: Check spelling
+        uses: crate-ci/[email protected]