diff --git a/.gitignore b/.gitignore index fc4ca3c45..d3e1ffb81 100644 --- a/.gitignore +++ b/.gitignore @@ -23,4 +23,4 @@ notebook/ markdown/ .vscode -*.html +*.html \ No newline at end of file diff --git a/benchmarks/GlobalOptimization/.CondaPkg/.gitattributes b/benchmarks/GlobalOptimization/.CondaPkg/.gitattributes new file mode 100644 index 000000000..887a2c18f --- /dev/null +++ b/benchmarks/GlobalOptimization/.CondaPkg/.gitattributes @@ -0,0 +1,2 @@ +# SCM syntax highlighting & preventing 3-way merges +pixi.lock merge=binary linguist-language=YAML linguist-generated=true diff --git a/benchmarks/GlobalOptimization/.CondaPkg/.gitignore b/benchmarks/GlobalOptimization/.CondaPkg/.gitignore new file mode 100644 index 000000000..740bb7d1a --- /dev/null +++ b/benchmarks/GlobalOptimization/.CondaPkg/.gitignore @@ -0,0 +1,4 @@ + +# pixi environments +.pixi +*.egg-info diff --git a/benchmarks/GlobalOptimization/.CondaPkg/meta b/benchmarks/GlobalOptimization/.CondaPkg/meta new file mode 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"strict" +description = "automatically generated by CondaPkg.jl" diff --git a/benchmarks/GlobalOptimization/Manifest.toml b/benchmarks/GlobalOptimization/Manifest.toml index 242c5b4cb..e4d6a3c00 100644 --- a/benchmarks/GlobalOptimization/Manifest.toml +++ b/benchmarks/GlobalOptimization/Manifest.toml @@ -1,13 +1,13 @@ # This file is machine-generated - editing it directly is not advised -julia_version = "1.10.9" +julia_version = "1.10.10" manifest_format = "2.0" -project_hash = "c28543411219efac390044c93bdbf3644f03f1a3" +project_hash = "00e2698f2231086ca8ebd3a0611f548bf3a3797e" [[deps.ADTypes]] -git-tree-sha1 = "e2478490447631aedba0823d4d7a80b2cc8cdb32" +git-tree-sha1 = "27cecae79e5cc9935255f90c53bb831cc3c870d7" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "1.14.0" +version = "1.18.0" [deps.ADTypes.extensions] ADTypesChainRulesCoreExt = "ChainRulesCore" @@ -56,9 +56,9 @@ version = "0.1.42" [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "f7817e2e585aa6d924fd714df1e2a84be7896c60" +git-tree-sha1 = "7e35fca2bdfba44d797c53dfe63a51fabf39bfc0" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "4.3.0" +version = "4.4.0" [deps.Adapt.extensions] AdaptSparseArraysExt = "SparseArrays" @@ -80,18 +80,19 @@ version = "1.1.1" [[deps.ArrayInterface]] deps = ["Adapt", "LinearAlgebra"] -git-tree-sha1 = "9606d7832795cbef89e06a550475be300364a8aa" +git-tree-sha1 = "d81ae5489e13bc03567d4fbbb06c546a5e53c857" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.19.0" +version = "7.22.0" [deps.ArrayInterface.extensions] ArrayInterfaceBandedMatricesExt = "BandedMatrices" ArrayInterfaceBlockBandedMatricesExt = "BlockBandedMatrices" ArrayInterfaceCUDAExt = "CUDA" - ArrayInterfaceCUDSSExt = "CUDSS" + ArrayInterfaceCUDSSExt = ["CUDSS", "CUDA"] ArrayInterfaceChainRulesCoreExt = "ChainRulesCore" ArrayInterfaceChainRulesExt = "ChainRules" ArrayInterfaceGPUArraysCoreExt = "GPUArraysCore" + ArrayInterfaceMetalExt = "Metal" ArrayInterfaceReverseDiffExt = "ReverseDiff" ArrayInterfaceSparseArraysExt = "SparseArrays" ArrayInterfaceStaticArraysCoreExt = "StaticArraysCore" @@ -105,6 +106,7 @@ version = "7.19.0" ChainRules = "082447d4-558c-5d27-93f4-14fc19e9eca2" ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" GPUArraysCore = "46192b85-c4d5-4398-a991-12ede77f4527" + Metal = "dde4c033-4e86-420c-a63e-0dd931031962" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" StaticArraysCore = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" @@ -118,9 +120,9 @@ uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" [[deps.BenchmarkTools]] deps = ["Compat", "JSON", "Logging", "Printf", "Profile", "Statistics", "UUIDs"] -git-tree-sha1 = "e38fbc49a620f5d0b660d7f543db1009fe0f8336" +git-tree-sha1 = "7fecfb1123b8d0232218e2da0c213004ff15358d" uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" -version = "1.6.0" +version = "1.6.3" [[deps.BitFlags]] git-tree-sha1 = "0691e34b3bb8be9307330f88d1a3c3f25466c24d" @@ -139,9 +141,9 @@ weakdeps = ["HTTP", "Sockets"] [[deps.BlackBoxOptimizationBenchmarking]] deps = ["Distributions", "LinearAlgebra", "Memoize", "Optim", "Optimization", "RecipesBase"] -git-tree-sha1 = "83ba537991d83df5bffa9d38d03ef3f7bcc479a0" +git-tree-sha1 = "3411a2cf843066af8ae07e464b924db85e56459a" uuid = "4552ee2b-11da-5aef-8e78-0d48532001f1" -version = "1.0.0" +version = "1.0.1" [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -167,9 +169,9 @@ version = "1.18.5+0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra"] -git-tree-sha1 = "1713c74e00545bfe14605d2a2be1712de8fbcb58" +git-tree-sha1 = "e4c6a16e77171a5f5e25e9646617ab1c276c5607" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.25.1" +version = "1.26.0" weakdeps = ["SparseArrays"] [deps.ChainRulesCore.extensions] @@ -189,9 +191,9 @@ version = "0.7.8" [[deps.ColorSchemes]] deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] -git-tree-sha1 = "403f2d8e209681fcbd9468a8514efff3ea08452e" +git-tree-sha1 = "b0fd3f56fa442f81e0a47815c92245acfaaa4e34" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.29.0" +version = "3.31.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -239,9 +241,9 @@ version = "0.3.1" [[deps.Compat]] deps = ["TOML", "UUIDs"] -git-tree-sha1 = "8ae8d32e09f0dcf42a36b90d4e17f5dd2e4c4215" +git-tree-sha1 = "9d8a54ce4b17aa5bdce0ea5c34bc5e7c340d16ad" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "4.16.0" +version = "4.18.1" weakdeps = ["Dates", "LinearAlgebra"] [deps.Compat.extensions] @@ -269,9 +271,15 @@ version = "2.5.0" [[deps.Conda]] deps = ["Downloads", "JSON", "VersionParsing"] -git-tree-sha1 = "b19db3927f0db4151cb86d073689f2428e524576" +git-tree-sha1 = "8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9" uuid = "8f4d0f93-b110-5947-807f-2305c1781a2d" -version = "1.10.2" +version = "1.10.3" + +[[deps.CondaPkg]] +deps = ["JSON3", "Markdown", "MicroMamba", "Pidfile", "Pkg", "Preferences", "Scratch", "TOML", "pixi_jll"] +git-tree-sha1 = "bd491d55b97a036caae1d78729bdb70bf7dababc" +uuid = "992eb4ea-22a4-4c89-a5bb-47a3300528ab" +version = "0.2.33" [[deps.ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -280,9 +288,9 @@ uuid = "88cd18e8-d9cc-4ea6-8889-5259c0d15c8b" version = "0.1.2" [[deps.ConstructionBase]] -git-tree-sha1 = "76219f1ed5771adbb096743bff43fb5fdd4c1157" +git-tree-sha1 = "b4b092499347b18a015186eae3042f72267106cb" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.8" +version = "1.6.0" [deps.ConstructionBase.extensions] ConstructionBaseIntervalSetsExt = "IntervalSets" @@ -299,21 +307,16 @@ git-tree-sha1 = "439e35b0b36e2e5881738abc8857bd92ad6ff9a8" uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" version = "0.6.3" -[[deps.Crayons]] -git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15" -uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" -version = "4.1.1" - [[deps.DataAPI]] git-tree-sha1 = 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"8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["AliasTables", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] -git-tree-sha1 = "3e6d038b77f22791b8e3472b7c633acea1ecac06" +git-tree-sha1 = "3bc002af51045ca3b47d2e1787d6ce02e68b943a" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.120" +version = "0.25.122" [deps.Distributions.extensions] DistributionsChainRulesCoreExt = "ChainRulesCore" @@ -430,9 +433,9 @@ version = "0.25.120" Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.DocStringExtensions]] -git-tree-sha1 = "e7b7e6f178525d17c720ab9c081e4ef04429f860" +git-tree-sha1 = "7442a5dfe1ebb773c29cc2962a8980f47221d76c" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.9.4" +version = "0.9.5" [[deps.Downloads]] deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"] @@ -464,9 +467,9 @@ version = "0.1.11" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "d55dffd9ae73ff72f1c0482454dcf2ec6c6c4a63" +git-tree-sha1 = "27af30de8b5445644e8ffe3bcb0d72049c089cf1" uuid = "2e619515-83b5-522b-bb60-26c02a35a201" -version = "2.6.5+0" +version = "2.7.3+0" [[deps.ExprTools]] git-tree-sha1 = "27415f162e6028e81c72b82ef756bf321213b6ec" @@ -480,15 +483,15 @@ version = "0.10.14" [[deps.FFMPEG]] deps = ["FFMPEG_jll"] -git-tree-sha1 = "53ebe7511fa11d33bec688a9178fac4e49eeee00" +git-tree-sha1 = "83dc665d0312b41367b7263e8a4d172eac1897f4" uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a" -version = "0.4.2" +version = "0.4.4" [[deps.FFMPEG_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "PCRE2_jll", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] -git-tree-sha1 = "466d45dc38e15794ec7d5d63ec03d776a9aff36e" +git-tree-sha1 = "3a948313e7a41eb1db7a1e733e6335f17b4ab3c4" uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5" -version = "4.4.4+1" +version = "7.1.1+0" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -500,9 +503,9 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra"] -git-tree-sha1 = "6a70198746448456524cb442b8af316927ff3e1a" +git-tree-sha1 = "173e4d8f14230a7523ae11b9a3fa9edb3e0efd78" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.13.0" +version = "1.14.0" weakdeps = ["PDMats", "SparseArrays", "Statistics"] [deps.FillArrays.extensions] @@ -512,9 +515,9 @@ weakdeps = ["PDMats", "SparseArrays", "Statistics"] [[deps.FiniteDiff]] deps = ["ArrayInterface", "LinearAlgebra", "Setfield"] -git-tree-sha1 = "f089ab1f834470c525562030c8cfde4025d5e915" +git-tree-sha1 = "9340ca07ca27093ff68418b7558ca37b05f8aeb1" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.27.0" +version = "2.29.0" [deps.FiniteDiff.extensions] FiniteDiffBandedMatricesExt = "BandedMatrices" @@ -536,9 +539,9 @@ version = "0.8.5" [[deps.Fontconfig_jll]] deps = ["Artifacts", "Bzip2_jll", "Expat_jll", "FreeType2_jll", "JLLWrappers", "Libdl", "Libuuid_jll", "Zlib_jll"] -git-tree-sha1 = "301b5d5d731a0654825f1f2e906990f7141a106b" +git-tree-sha1 = "f85dac9a96a01087df6e3a749840015a0ca3817d" uuid = "a3f928ae-7b40-5064-980b-68af3947d34b" -version = "2.16.0+0" +version = "2.17.1+0" [[deps.Format]] git-tree-sha1 = "9c68794ef81b08086aeb32eeaf33531668d5f5fc" @@ -547,9 +550,9 @@ version = "1.3.7" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"] -git-tree-sha1 = "a2df1b776752e3f344e5116c06d75a10436ab853" +git-tree-sha1 = "ba6ce081425d0afb2bedd00d9884464f764a9225" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "0.10.38" +version = "1.2.2" [deps.ForwardDiff.extensions] ForwardDiffStaticArraysExt = "StaticArrays" @@ -604,39 +607,51 @@ version = "0.2.0" [[deps.GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Preferences", "Printf", "Qt6Wayland_jll", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "p7zip_jll"] -git-tree-sha1 = "4424dca1462cc3f19a0e6f07b809ad948ac1d62b" +git-tree-sha1 = "1828eb7275491981fa5f1752a5e126e8f26f8741" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.73.16" +version = "0.73.17" [[deps.GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "FreeType2_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt6Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "d7ecfaca1ad1886de4f9053b5b8aef34f36ede7f" +git-tree-sha1 = "27299071cc29e409488ada41ec7643e0ab19091f" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.73.16+0" +version = "0.73.17+0" -[[deps.Gettext_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] -git-tree-sha1 = "9b02998aba7bf074d14de89f9d37ca24a1a0b046" -uuid = "78b55507-aeef-58d4-861c-77aaff3498b1" -version = "0.21.0+0" +[[deps.GettextRuntime_jll]] +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll"] +git-tree-sha1 = "45288942190db7c5f760f59c04495064eedf9340" +uuid = "b0724c58-0f36-5564-988d-3bb0596ebc4a" +version = "0.22.4+0" + +[[deps.Ghostscript_jll]] +deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Zlib_jll"] +git-tree-sha1 = "38044a04637976140074d0b0621c1edf0eb531fd" +uuid = "61579ee1-b43e-5ca0-a5da-69d92c66a64b" +version = "9.55.1+0" [[deps.Git]] -deps = ["Git_jll", "JLLWrappers", "OpenSSH_jll"] -git-tree-sha1 = "2230a9cc32394b11a3b3aa807a382e3bbab1198c" +deps = ["Git_LFS_jll", "Git_jll", "JLLWrappers", "OpenSSH_jll"] +git-tree-sha1 = "824a1890086880696fc908fe12a17bcf61738bd8" uuid = "d7ba0133-e1db-5d97-8f8c-041e4b3a1eb2" -version = "1.4.0" +version = "1.5.0" + +[[deps.Git_LFS_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "bb8471f313ed941f299aa53d32a94ab3bee08844" +uuid = "020c3dae-16b3-5ae5-87b3-4cb189e250b2" +version = "3.7.0+0" [[deps.Git_jll]] deps = ["Artifacts", "Expat_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Libiconv_jll", "OpenSSL_jll", "PCRE2_jll", "Zlib_jll"] -git-tree-sha1 = "2f6d6f7e6d6de361865d4394b802c02fc944fc7c" +git-tree-sha1 = "96fbb1a5c700942301cf65d8546690dd3b2a6a79" uuid = "f8c6e375-362e-5223-8a59-34ff63f689eb" -version = "2.49.0+0" +version = "2.51.2+0" [[deps.Glib_jll]] -deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"] -git-tree-sha1 = "fee60557e4f19d0fe5cd169211fdda80e494f4e8" +deps = ["Artifacts", "GettextRuntime_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"] +git-tree-sha1 = "50c11ffab2a3d50192a228c313f05b5b5dc5acb2" uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" -version = "2.84.0+0" +version = "2.86.0+0" [[deps.Graphite2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -651,9 +666,9 @@ version = "1.0.2" [[deps.HTTP]] deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "PrecompileTools", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "f93655dc73d7a0b4a368e3c0bce296ae035ad76e" +git-tree-sha1 = "5e6fe50ae7f23d171f44e311c2960294aaa0beb5" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.10.16" +version = "1.10.19" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll"] @@ -674,10 +689,14 @@ uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" version = "0.3.28" [[deps.IJulia]] -deps = ["Base64", "Conda", "Dates", "InteractiveUtils", "JSON", "Logging", "Markdown", "MbedTLS", "Pkg", "Printf", "REPL", "Random", "SoftGlobalScope", "UUIDs", "ZMQ"] -git-tree-sha1 = "be30be76e25b0aff2c9a85930ed3ac34c5f10c83" +deps = ["Base64", "Conda", "Dates", "InteractiveUtils", "JSON", "Logging", "Markdown", "Pkg", "PrecompileTools", "Printf", "REPL", "Random", "SHA", "Sockets", "UUIDs", "ZMQ"] +git-tree-sha1 = "cdda5c1e16dace665ea5481460a3b6728f24a825" uuid = "7073ff75-c697-5162-941a-fcdaad2a7d2a" -version = "1.27.0" +version = "1.31.1" +weakdeps = ["PythonCall"] + + [deps.IJulia.extensions] + PythonCallExt = "PythonCall" [[deps.InteractiveUtils]] deps = ["Markdown"] @@ -694,9 +713,9 @@ weakdeps = ["Dates", "Test"] InverseFunctionsTestExt = "Test" [[deps.IrrationalConstants]] -git-tree-sha1 = "e2222959fbc6c19554dc15174c81bf7bf3aa691c" +git-tree-sha1 = "b2d91fe939cae05960e760110b328288867b5758" uuid = "92d709cd-6900-40b7-9082-c6be49f344b6" -version = "0.2.4" +version = "0.2.6" [[deps.IteratorInterfaceExtensions]] git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856" @@ -711,9 +730,9 @@ version = "0.1.11" [[deps.JLLWrappers]] deps = ["Artifacts", "Preferences"] -git-tree-sha1 = "a007feb38b422fbdab534406aeca1b86823cb4d6" +git-tree-sha1 = "0533e564aae234aff59ab625543145446d8b6ec2" uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" -version = "1.7.0" +version = "1.7.1" [[deps.JMcDM]] deps = ["Requires"] @@ -747,21 +766,21 @@ version = "0.2.1" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "eac1206917768cb54957c65a615460d87b455fc1" +git-tree-sha1 = "4255f0032eafd6451d707a51d5f0248b8a165e4d" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "3.1.1+0" +version = "3.1.3+0" [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "b29d37ce30fa401a4563b18880ab91f979a29734" +git-tree-sha1 = "d1fc961038207e43982851e57ee257adc37be5e8" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.10" +version = "0.10.2" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "170b660facf5df5de098d866564877e119141cbd" +git-tree-sha1 = "059aabebaa7c82ccb853dd4a0ee9d17796f7e1bc" uuid = "c1c5ebd0-6772-5130-a774-d5fcae4a789d" -version = "3.100.2+0" +version = "3.100.3+0" [[deps.LBFGSB]] deps = ["L_BFGS_B_jll"] @@ -805,10 +824,10 @@ uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f" version = "1.4.0" [[deps.Latexify]] -deps = ["Format", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Requires"] -git-tree-sha1 = "4f34eaabe49ecb3fb0d58d6015e32fd31a733199" +deps = ["Format", "Ghostscript_jll", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Requires"] +git-tree-sha1 = "44f93c47f9cd6c7e431f2f2091fcba8f01cd7e8f" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.16.8" +version = "0.16.10" [deps.Latexify.extensions] DataFramesExt = "DataFrames" @@ -822,11 +841,15 @@ version = "0.16.8" SymEngine = "123dc426-2d89-5057-bbad-38513e3affd8" tectonic_jll = "d7dd28d6-a5e6-559c-9131-7eb760cdacc5" +[[deps.LazyArtifacts]] +deps = ["Artifacts", "Pkg"] +uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" + [[deps.LeftChildRightSiblingTrees]] deps = ["AbstractTrees"] -git-tree-sha1 = "fb6803dafae4a5d62ea5cab204b1e657d9737e7f" +git-tree-sha1 = "95ba48564903b43b2462318aa243ee79d81135ff" uuid = "1d6d02ad-be62-4b6b-8a6d-2f90e265016e" -version = "0.2.0" +version = "0.2.1" [[deps.LibCURL]] deps = ["LibCURL_jll", "MozillaCACerts_jll"] @@ -875,27 +898,27 @@ version = "1.18.0+0" [[deps.Libmount_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "a31572773ac1b745e0343fe5e2c8ddda7a37e997" +git-tree-sha1 = "3acf07f130a76f87c041cfb2ff7d7284ca67b072" uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" -version = "2.41.0+0" +version = "2.41.2+0" [[deps.Libtiff_jll]] deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "XZ_jll", "Zlib_jll", "Zstd_jll"] -git-tree-sha1 = "4ab7581296671007fc33f07a721631b8855f4b1d" +git-tree-sha1 = "f04133fe05eff1667d2054c53d59f9122383fe05" uuid = "89763e89-9b03-5906-acba-b20f662cd828" -version = "4.7.1+0" +version = "4.7.2+0" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "321ccef73a96ba828cd51f2ab5b9f917fa73945a" +git-tree-sha1 = "2a7a12fc0a4e7fb773450d17975322aa77142106" uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700" -version = "2.41.0+0" +version = "2.41.2+0" [[deps.LineSearches]] deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "Printf"] -git-tree-sha1 = "e4c3be53733db1051cc15ecf573b1042b3a712a1" +git-tree-sha1 = "4adee99b7262ad2a1a4bbbc59d993d24e55ea96f" uuid = "d3d80556-e9d4-5f37-9878-2ab0fcc64255" -version = "7.3.0" +version = "7.4.0" [[deps.LinearAlgebra]] deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"] @@ -903,9 +926,9 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearOperators]] deps = ["FastClosures", "LinearAlgebra", "Printf", "Requires", "SparseArrays", "TimerOutputs"] -git-tree-sha1 = "1894a798ed8887895c5ae70f1fe8331c0c1d8480" +git-tree-sha1 = "db137007d2c4ed948aa5f2518a2b451851ea8bda" uuid = "5c8ed15e-5a4c-59e4-a42b-c7e8811fb125" -version = "2.10.0" +version = "2.11.0" [deps.LinearOperators.extensions] LinearOperatorsAMDGPUExt = "AMDGPU" @@ -944,9 +967,9 @@ uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" [[deps.LoggingExtras]] deps = ["Dates", "Logging"] -git-tree-sha1 = "f02b56007b064fbfddb4c9cd60161b6dd0f40df3" +git-tree-sha1 = "f00544d95982ea270145636c181ceda21c4e2575" uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" -version = "1.1.0" +version = "1.2.0" [[deps.MacroTools]] git-tree-sha1 = "1e0228a030642014fe5cfe68c2c0a818f9e3f522" @@ -959,9 +982,9 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" [[deps.MathOptInterface]] deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON3", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test"] -git-tree-sha1 = "d4eb6037ce33f974a58a2ea9ccba28beab2a93c1" +git-tree-sha1 = "a2cbab4256690aee457d136752c404e001f27768" uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" -version = "1.40.1" +version = "1.46.0" [[deps.MbedTLS]] deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "NetworkOptions", "Random", "Sockets"] @@ -987,9 +1010,15 @@ version = "0.4.4" [[deps.Metaheuristics]] deps = ["Distances", "JMcDM", "LinearAlgebra", "Pkg", "Printf", "Random", "Reexport", "Requires", "SearchSpaces", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "03d457e957cb8238d787525b8fec04ece4cbac9a" +git-tree-sha1 = "4362c6421e39755991b174d185e89e841c7c37bf" uuid = "bcdb8e00-2c21-11e9-3065-2b553b22f898" -version = "3.4.0" +version = "3.4.1" + +[[deps.MicroMamba]] +deps = ["Pkg", "Scratch", "micromamba_jll"] +git-tree-sha1 = "011cab361eae7bcd7d278f0a7a00ff9c69000c51" +uuid = "0b3b1443-0f03-428d-bdfb-f27f9c1191ea" +version = "0.1.14" [[deps.Missings]] deps = ["DataAPI"] @@ -1002,9 +1031,9 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" [[deps.Moshi]] deps = ["ExproniconLite", "Jieko"] -git-tree-sha1 = "453de0fc2be3d11b9b93ca4d0fddd91196dcf1ed" +git-tree-sha1 = "53f817d3e84537d84545e0ad749e483412dd6b2a" uuid = "2e0e35c7-a2e4-4343-998d-7ef72827ed2d" -version = "0.3.5" +version = "0.3.7" [[deps.MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" @@ -1012,27 +1041,27 @@ version = "2023.1.10" [[deps.Mustache]] deps = ["Printf", "Tables"] -git-tree-sha1 = "3b2db451a872b20519ebb0cec759d3d81a1c6bcb" +git-tree-sha1 = "3cbd5dda543bc59f2e482607ccf84b633724fc32" uuid = "ffc61752-8dc7-55ee-8c37-f3e9cdd09e70" -version = "1.0.20" +version = "1.0.21" [[deps.MutableArithmetics]] deps = ["LinearAlgebra", "SparseArrays", "Test"] -git-tree-sha1 = "491bdcdc943fcbc4c005900d7463c9f216aabf4c" +git-tree-sha1 = "22df8573f8e7c593ac205455ca088989d0a2c7a0" uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" -version = "1.6.4" +version = "1.6.7" [[deps.NLSolversBase]] deps = ["ADTypes", "DifferentiationInterface", "Distributed", "FiniteDiff", "ForwardDiff"] -git-tree-sha1 = "b14c7be6046e7d48e9063a0053f95ee0fc954176" +git-tree-sha1 = "25a6638571a902ecfb1ae2a18fc1575f86b1d4df" uuid = "d41bc354-129a-5804-8e4c-c37616107c6c" -version = "7.9.1" +version = "7.10.0" [[deps.NLopt]] deps = ["CEnum", "NLopt_jll"] -git-tree-sha1 = "35a8d661041aa6a237d10e12c29a7251a58bf488" +git-tree-sha1 = "624785b15005a0e0f4e462b27ee745dbe5941863" uuid = "76087f3c-5699-56af-9a33-bf431cd00edd" -version = "1.1.4" +version = "1.2.1" weakdeps = ["MathOptInterface"] [deps.NLopt.extensions] @@ -1046,9 +1075,9 @@ version = "2.10.0+0" [[deps.NOMAD]] deps = ["Libdl", "LinearAlgebra", "NOMAD_jll", "SparseArrays", "Test", "Tulip"] -git-tree-sha1 = "9b918f45f00ecbeb5b1676cb7ee960b8b94f3f6a" +git-tree-sha1 = "dbe00e8d6fc1a2fd002fd718e66b878f0ec21e4a" uuid = "02130f1c-4665-5b79-af82-ff1385104aa0" -version = "2.4.1" +version = "2.4.2" [[deps.NOMAD_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1076,10 +1105,10 @@ weakdeps = ["Adapt"] OffsetArraysAdaptExt = "Adapt" [[deps.Ogg_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "887579a3eb005446d514ab7aeac5d1d027658b8f" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "b6aa4566bb7ae78498a5e68943863fa8b5231b59" uuid = "e7412a2a-1a6e-54c0-be00-318e2571c051" -version = "1.3.5+1" +version = "1.3.6+0" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] @@ -1089,13 +1118,13 @@ version = "0.3.23+4" [[deps.OpenLibm_jll]] deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" -version = "0.8.1+4" +version = "0.8.5+0" [[deps.OpenSSH_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "OpenSSL_jll", "Zlib_jll"] -git-tree-sha1 = "cb7acd5d10aff809b4d0191dfe1956c2edf35800" +git-tree-sha1 = "301412a644646fdc0ad67d0a87487466b491e53d" uuid = "9bd350c2-7e96-507f-8002-3f2e150b4e1b" -version = "10.0.1+0" +version = "10.2.1+0" [[deps.OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] @@ -1105,9 +1134,9 @@ version = "1.5.0" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "9216a80ff3682833ac4b733caa8c00390620ba5d" +git-tree-sha1 = "f19301ae653233bc88b1810ae908194f07f8db9d" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "3.5.0+0" +version = "3.5.4+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl"] @@ -1117,9 +1146,9 @@ version = "0.5.6+0" [[deps.Optim]] deps = ["Compat", "EnumX", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] -git-tree-sha1 = "31b3b1b8e83ef9f1d50d74f1dd5f19a37a304a1f" +git-tree-sha1 = "61942645c38dd2b5b78e2082c9b51ab315315d10" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "1.12.0" +version = "1.13.2" weakdeps = ["MathOptInterface"] [deps.Optim.extensions] @@ -1142,22 +1171,22 @@ version = "0.4.6" Reactant = "3c362404-f566-11ee-1572-e11a4b42c853" [[deps.Optimization]] -deps = ["ADTypes", "ArrayInterface", "ConsoleProgressMonitor", "DocStringExtensions", "LBFGSB", "LinearAlgebra", "Logging", "LoggingExtras", "OptimizationBase", "Printf", "ProgressLogging", "Reexport", "SciMLBase", "SparseArrays", "TerminalLoggers"] -git-tree-sha1 = "89002c7a2f776c47b693d95acbf8f5c098f4ff8a" +deps = ["ADTypes", "ArrayInterface", "ConsoleProgressMonitor", "DocStringExtensions", "LBFGSB", "LinearAlgebra", "Logging", "LoggingExtras", "OptimizationBase", "Printf", "ProgressLogging", "Random", "Reexport", "SciMLBase", "SparseArrays", "TerminalLoggers"] +git-tree-sha1 = "fa2449ce34cc1d7b2191bad4d3356a5376412288" uuid = "7f7a1694-90dd-40f0-9382-eb1efda571ba" -version = "4.3.0" +version = "4.8.0" [[deps.OptimizationBBO]] deps = ["BlackBoxOptim", "Optimization", "Reexport"] -git-tree-sha1 = "4bf2807645a2ad0964e058f9ff971471136f09cd" +git-tree-sha1 = "d50660033a890b9ae630bee1ddb821bd31b9d77d" uuid = "3e6eede4-6085-4f62-9a71-46d9bc1eb92b" -version = "0.4.1" +version = "0.4.2" [[deps.OptimizationBase]] -deps = ["ADTypes", "ArrayInterface", "DifferentiationInterface", "DocStringExtensions", "FastClosures", "LinearAlgebra", "PDMats", "Reexport", "Requires", "SciMLBase", "SparseArrays", "SparseConnectivityTracer", "SparseMatrixColorings"] -git-tree-sha1 = "918d9bf579a355222e62ceac955b5382fea7bd61" +deps = ["ADTypes", "ArrayInterface", "DifferentiationInterface", "DocStringExtensions", "FastClosures", "LinearAlgebra", "PDMats", "Reexport", "SciMLBase", "SparseArrays", "SparseConnectivityTracer", "SparseMatrixColorings"] +git-tree-sha1 = "a4d72b85ec4b0ef7aca1a1e067406fcc673addae" uuid = "bca83a33-5cc9-4baa-983d-23429ab6bcbb" -version = "2.7.0" +version = "2.14.0" [deps.OptimizationBase.extensions] OptimizationEnzymeExt = "Enzyme" @@ -1183,51 +1212,63 @@ version = "2.7.0" [[deps.OptimizationEvolutionary]] deps = ["Evolutionary", "Optimization", "Reexport"] -git-tree-sha1 = "29e56bc34a34d2d3206d98a92f70e69ffc6af343" +git-tree-sha1 = "6404d486b3ece8f0512df31d1759d99120a61740" uuid = "cb963754-43f6-435e-8d4b-99009ff27753" -version = "0.4.1" +version = "0.4.2" [[deps.OptimizationMetaheuristics]] deps = ["Metaheuristics", "Optimization", "Reexport"] -git-tree-sha1 = "cbd48bc48289997c8f47b6b314a32db837e05930" +git-tree-sha1 = "20f6dff04ee2abb511d317e2efe37d5696668b4f" uuid = "3aafef2f-86ae-4776-b337-85a36adf0b55" -version = "0.3.0" +version = "0.3.2" [[deps.OptimizationNLopt]] deps = ["NLopt", "Optimization", "Random", "Reexport"] -git-tree-sha1 = "da55bae039168c0ef977bd5926cd5208c6cd13cf" +git-tree-sha1 = "49d76b9da5210991366ff9b685287a412f6ea69b" uuid = "4e6fcdb7-1186-4e1f-a706-475e75c168bb" -version = "0.3.2" +version = "0.3.4" [[deps.OptimizationNOMAD]] deps = ["NOMAD", "Optimization", "Reexport"] -git-tree-sha1 = "1977fd57e5536abc279cc1443368a0220a781fb0" +git-tree-sha1 = "ec9c162a0eca92f5d4ae79cb45a15b95298fb39c" uuid = "2cab0595-8222-4775-b714-9828e6a9e01b" -version = "0.3.1" +version = "0.3.2" [[deps.OptimizationOptimJL]] deps = ["Optim", "Optimization", "PrecompileTools", "Reexport", "SparseArrays"] -git-tree-sha1 = "6f228118b81ce4e849091ee0d00805f2ecb18f54" +git-tree-sha1 = "d9e2cca329ce969a3dc26c9278d77bfeff7012ef" uuid = "36348300-93cb-4f02-beb5-3c3902f8871e" -version = "0.4.3" +version = "0.4.5" [[deps.OptimizationOptimisers]] deps = ["Optimisers", "Optimization", "Printf", "ProgressLogging", "Reexport"] -git-tree-sha1 = "4a2c2d4bb4eb6bbab8e2871657372cf743ff50d5" +git-tree-sha1 = "ea6169605fe93e02df87874f388279ae766175d9" uuid = "42dfb2eb-d2b4-4451-abcd-913932933ac1" -version = "0.3.7" +version = "0.3.11" [[deps.OptimizationPRIMA]] deps = ["Optimization", "PRIMA", "Reexport"] -git-tree-sha1 = "f11194dfd6c09d6af41bc06e40c2d972774c7050" +git-tree-sha1 = "5e697185976504eb08701251b87f455c250a61ee" uuid = "72f8369c-a2ea-4298-9126-56167ce9cbc2" -version = "0.3.0" +version = "0.3.1" + +[[deps.OptimizationPyCMA]] +deps = ["CondaPkg", "Optimization", "PythonCall", "Reexport", "Test"] +git-tree-sha1 = "ac238e84438e15e40253c62a9bb21555131c3c79" +uuid = "fb0822aa-1fe5-41d8-99a6-e7bf6c238d3b" +version = "1.0.0" + +[[deps.OptimizationSciPy]] +deps = ["Optimization", "PythonCall", "Reexport"] +git-tree-sha1 = "bbff19a0767ece5b4680be3670d4542369fcb99a" +uuid = "cce07bd8-c79b-4b00-aee8-8db9cce22837" +version = "0.4.2" [[deps.Opus_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "6703a85cb3781bd5909d48730a67205f3f31a575" +git-tree-sha1 = "c392fc5dd032381919e3b22dd32d6443760ce7ea" uuid = "91d4177d-7536-5919-b921-800302f37372" -version = "1.3.3+0" +version = "1.5.2+0" [[deps.OrderedCollections]] git-tree-sha1 = "05868e21324cede2207c6f0f466b4bfef6d5e7ee" @@ -1246,10 +1287,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.35" [[deps.PRIMA]] -deps = ["LinearAlgebra", "PRIMA_jll", "Requires", "TypeUtils"] -git-tree-sha1 = "e28122cbaab93ad6ba46da1bd45915110282bb87" +deps = ["LinearAlgebra", "PRIMA_jll", "TypeUtils"] +git-tree-sha1 = "a066ecc3478e57377411d748125f572bf4e39cf3" uuid = "0a7d04aa-8ac2-47b3-b7a7-9dbd6ad661ed" -version = "0.2.2" +version = "0.2.4" [deps.PRIMA.extensions] PRIMACUTEstExt = "CUTEst" @@ -1267,9 +1308,9 @@ version = "0.7.1+0" [[deps.Pango_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl"] -git-tree-sha1 = "275a9a6d85dc86c24d03d1837a0010226a96f540" +git-tree-sha1 = "1f7f9bbd5f7a2e5a9f7d96e51c9754454ea7f60b" uuid = "36c8627f-9965-5494-a995-c6b170f724f3" -version = "1.56.3+0" +version = "1.56.4+0" [[deps.Parameters]] deps = ["OrderedCollections", "UnPack"] @@ -1283,6 +1324,12 @@ git-tree-sha1 = "7d2f8f21da5db6a806faf7b9b292296da42b2810" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" version = "2.8.3" +[[deps.Pidfile]] +deps = ["FileWatching", "Test"] +git-tree-sha1 = "2d8aaf8ee10df53d0dfb9b8ee44ae7c04ced2b03" +uuid = "fa939f87-e72e-5be4-a000-7fc836dbe307" +version = "1.3.0" + [[deps.Pixman_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "Libdl"] git-tree-sha1 = "db76b1ecd5e9715f3d043cec13b2ec93ce015d53" @@ -1307,10 +1354,10 @@ uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" version = "1.4.3" [[deps.Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "TOML", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "809ba625a00c605f8d00cd2a9ae19ce34fc24d68" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "TOML", "UUIDs", "UnicodeFun", "Unzip"] +git-tree-sha1 = "12ce661880f8e309569074a61d3767e5756a199f" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.40.13" +version = "1.41.1" [deps.Plots.extensions] FileIOExt = "FileIO" @@ -1332,6 +1379,22 @@ git-tree-sha1 = "17275485f373e6673f7e7f97051f703ed5b15b20" uuid = "85a6dd25-e78a-55b7-8502-1745935b8125" version = "0.2.4" +[[deps.PreallocationTools]] +deps = ["Adapt", "ArrayInterface", "PrecompileTools"] +git-tree-sha1 = "c05b4c6325262152483a1ecb6c69846d2e01727b" +uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" +version = "0.4.34" + + [deps.PreallocationTools.extensions] + PreallocationToolsForwardDiffExt = "ForwardDiff" + PreallocationToolsReverseDiffExt = "ReverseDiff" + PreallocationToolsSparseConnectivityTracerExt = "SparseConnectivityTracer" + + [deps.PreallocationTools.weakdeps] + ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" + ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" + SparseConnectivityTracer = "9f842d2f-2579-4b1d-911e-f412cf18a3f5" + [[deps.PrecompileTools]] deps = ["Preferences"] git-tree-sha1 = "5aa36f7049a63a1528fe8f7c3f2113413ffd4e1f" @@ -1340,15 +1403,9 @@ version = "1.2.1" [[deps.Preferences]] deps = ["TOML"] -git-tree-sha1 = "9306f6085165d270f7e3db02af26a400d580f5c6" +git-tree-sha1 = "0f27480397253da18fe2c12a4ba4eb9eb208bf3d" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.4.3" - -[[deps.PrettyTables]] -deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "1101cd475833706e4d0e7b122218257178f48f34" -uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.4.0" +version = "1.5.0" [[deps.Printf]] deps = ["Unicode"] @@ -1360,21 +1417,35 @@ uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79" [[deps.ProgressLogging]] deps = ["Logging", "SHA", "UUIDs"] -git-tree-sha1 = "80d919dee55b9c50e8d9e2da5eeafff3fe58b539" +git-tree-sha1 = "d95ed0324b0799843ac6f7a6a85e65fe4e5173f0" uuid = "33c8b6b6-d38a-422a-b730-caa89a2f386c" -version = "0.1.4" +version = "0.1.5" [[deps.ProgressMeter]] deps = ["Distributed", "Printf"] -git-tree-sha1 = "13c5103482a8ed1536a54c08d0e742ae3dca2d42" +git-tree-sha1 = "fbb92c6c56b34e1a2c4c36058f68f332bec840e7" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" -version = "1.10.4" +version = "1.11.0" [[deps.PtrArrays]] git-tree-sha1 = "1d36ef11a9aaf1e8b74dacc6a731dd1de8fd493d" uuid = "43287f4e-b6f4-7ad1-bb20-aadabca52c3d" version = "1.3.0" +[[deps.PythonCall]] +deps = ["CondaPkg", "Dates", "Libdl", "MacroTools", "Markdown", "Pkg", "Serialization", "Tables", "UnsafePointers"] +git-tree-sha1 = "34510e11cabd7964291f32f14d28b367e9960e6e" +uuid = "6099a3de-0909-46bc-b1f4-468b9a2dfc0d" +version = "0.9.28" + + [deps.PythonCall.extensions] + CategoricalArraysExt = "CategoricalArrays" + PyCallExt = "PyCall" + + [deps.PythonCall.weakdeps] + CategoricalArrays = "324d7699-5711-5eae-9e2f-1d82baa6b597" + PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0" + [[deps.QPSReader]] deps = ["Logging", "Pkg"] git-tree-sha1 = "374833c0c1fd5cc623278581bf0c8259d7b35f10" @@ -1383,9 +1454,9 @@ version = "0.2.1" [[deps.Qt6Base_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Vulkan_Loader_jll", "Xorg_libSM_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_cursor_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "libinput_jll", "xkbcommon_jll"] -git-tree-sha1 = "eb38d376097f47316fe089fc62cb7c6d85383a52" +git-tree-sha1 = "34f7e5d2861083ec7596af8b8c092531facf2192" uuid = "c0090381-4147-56d7-9ebc-da0b1113ec56" -version = "6.8.2+1" +version = "6.8.2+2" [[deps.Qt6Declarative_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Qt6Base_jll", "Qt6ShaderTools_jll"] @@ -1401,9 +1472,9 @@ version = "6.8.2+1" [[deps.Qt6Wayland_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Qt6Base_jll", "Qt6Declarative_jll"] -git-tree-sha1 = "2766344a35a1a5ec1147305c4b343055d7c22c90" +git-tree-sha1 = "8f528b0851b5b7025032818eb5abbeb8a736f853" uuid = "e99dba38-086e-5de3-a5b1-6e4c66e897c3" -version = "6.8.2+0" +version = "6.8.2+2" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] @@ -1438,30 +1509,34 @@ uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" version = "0.6.12" [[deps.RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "2e154f7d7e38db1af0a14ec751aba33360c3bef9" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"] +git-tree-sha1 = "51bdb23afaaa551f923a0e990f7c44a4451a26f1" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.33.0" +version = "3.39.0" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" RecursiveArrayToolsForwardDiffExt = "ForwardDiff" + RecursiveArrayToolsKernelAbstractionsExt = "KernelAbstractions" RecursiveArrayToolsMeasurementsExt = "Measurements" RecursiveArrayToolsMonteCarloMeasurementsExt = "MonteCarloMeasurements" RecursiveArrayToolsReverseDiffExt = ["ReverseDiff", "Zygote"] RecursiveArrayToolsSparseArraysExt = ["SparseArrays"] RecursiveArrayToolsStructArraysExt = "StructArrays" + RecursiveArrayToolsTablesExt = ["Tables"] RecursiveArrayToolsTrackerExt = "Tracker" RecursiveArrayToolsZygoteExt = "Zygote" [deps.RecursiveArrayTools.weakdeps] FastBroadcast = "7034ab61-46d4-4ed7-9d0f-46aef9175898" ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" + KernelAbstractions = "63c18a36-062a-441e-b654-da1e3ab1ce7c" Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7" MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca" ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" StructArrays = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" + Tables = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" @@ -1484,9 +1559,9 @@ version = "1.3.1" [[deps.Rmath]] deps = ["Random", "Rmath_jll"] -git-tree-sha1 = "852bd0f55565a9e973fcfee83a84413270224dc4" +git-tree-sha1 = "5b3d50eb374cea306873b371d3f8d3915a018f0b" uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa" -version = "0.8.0" +version = "0.9.0" [[deps.Rmath_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -1505,30 +1580,48 @@ uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" version = "0.7.0" [[deps.SciMLBase]] -deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Moshi", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"] -git-tree-sha1 = "ce947672206f6a3a2bee1017c690cfd5fd82d897" +deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Moshi", "PreallocationTools", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLLogging", "SciMLOperators", "SciMLPublic", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"] +git-tree-sha1 = "c678f19706d6413bd138110f6212cfd13bafdace" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.96.0" +version = "2.123.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" + SciMLBaseDifferentiationInterfaceExt = "DifferentiationInterface" + SciMLBaseDistributionsExt = "Distributions" + SciMLBaseEnzymeExt = "Enzyme" + SciMLBaseForwardDiffExt = "ForwardDiff" SciMLBaseMLStyleExt = "MLStyle" SciMLBaseMakieExt = "Makie" + SciMLBaseMeasurementsExt = "Measurements" + SciMLBaseMonteCarloMeasurementsExt = "MonteCarloMeasurements" + SciMLBaseMooncakeExt = "Mooncake" SciMLBasePartialFunctionsExt = "PartialFunctions" SciMLBasePyCallExt = "PyCall" SciMLBasePythonCallExt = "PythonCall" SciMLBaseRCallExt = "RCall" + SciMLBaseReverseDiffExt = "ReverseDiff" + SciMLBaseTrackerExt = "Tracker" SciMLBaseZygoteExt = ["Zygote", "ChainRulesCore"] [deps.SciMLBase.weakdeps] ChainRules = "082447d4-558c-5d27-93f4-14fc19e9eca2" ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + DifferentiationInterface = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63" + Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f" + Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" MLStyle = "d8e11817-5142-5d16-987a-aa16d5891078" Makie = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" + Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7" + MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca" + Mooncake = "da2b9cff-9c12-43a0-ae48-6db2b0edb7d6" PartialFunctions = "570af359-4316-4cb7-8c74-252c00c2016b" PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0" PythonCall = "6099a3de-0909-46bc-b1f4-468b9a2dfc0d" RCall = "6f49c342-dc21-5d91-9882-a32aef131414" + ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" + Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" [[deps.SciMLBenchmarks]] @@ -1537,17 +1630,28 @@ git-tree-sha1 = "f4076dd5a103010d48bb6c4e50c5526f6622fa96" uuid = "31c91b34-3c75-11e9-0341-95557aab0344" version = "0.1.3" +[[deps.SciMLLogging]] +deps = ["Logging", "LoggingExtras", "Preferences"] +git-tree-sha1 = "5a026f5549ad167cda34c67b62f8d3dc55754da3" +uuid = "a6db7da4-7206-11f0-1eab-35f2a5dbe1d1" +version = "1.3.1" + [[deps.SciMLOperators]] deps = ["Accessors", "ArrayInterface", "DocStringExtensions", "LinearAlgebra", "MacroTools"] -git-tree-sha1 = "85608e4aaf758547ffc4030c908318b432114ec9" +git-tree-sha1 = "c1053ba68ede9e4005fc925dd4e8723fcd96eef8" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "1.3.0" +version = "1.9.0" weakdeps = ["SparseArrays", "StaticArraysCore"] [deps.SciMLOperators.extensions] SciMLOperatorsSparseArraysExt = "SparseArrays" SciMLOperatorsStaticArraysCoreExt = "StaticArraysCore" +[[deps.SciMLPublic]] +git-tree-sha1 = "ed647f161e8b3f2973f24979ec074e8d084f1bee" +uuid = "431bcebd-1456-4ced-9d72-93c2757fff0b" +version = "1.0.0" + [[deps.SciMLStructures]] deps = ["ArrayInterface"] git-tree-sha1 = "566c4ed301ccb2a44cbd5a27da5f885e0ed1d5df" @@ -1556,9 +1660,9 @@ version = "1.7.0" [[deps.Scratch]] deps = ["Dates"] -git-tree-sha1 = "3bac05bc7e74a75fd9cba4295cde4045d9fe2386" +git-tree-sha1 = "9b81b8393e50b7d4e6d0a9f14e192294d3b7c109" uuid = "6c6a2e73-6563-6170-7368-637461726353" -version = "1.2.1" +version = "1.3.0" [[deps.SearchSpaces]] deps = ["Combinatorics", "Random"] @@ -1595,17 +1699,11 @@ version = "1.0.3" [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" -[[deps.SoftGlobalScope]] -deps = ["REPL"] -git-tree-sha1 = "986ec2b6162ccb95de5892ed17832f95badf770c" -uuid = "b85f4697-e234-5449-a836-ec8e2f98b302" -version = "1.1.0" - [[deps.SortingAlgorithms]] deps = ["DataStructures"] -git-tree-sha1 = "66e0a8e672a0bdfca2c3f5937efb8538b9ddc085" +git-tree-sha1 = "64d974c2e6fdf07f8155b5b2ca2ffa9069b608d9" uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c" -version = "1.2.1" +version = "1.2.2" [[deps.SparseArrays]] deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"] @@ -1614,19 +1712,19 @@ version = "1.10.0" [[deps.SparseConnectivityTracer]] deps = ["ADTypes", "DocStringExtensions", "FillArrays", "LinearAlgebra", "Random", "SparseArrays"] -git-tree-sha1 = "fadb2d7010dd92912e5eb31a493613ad4b8c9583" +git-tree-sha1 = "62f3dbfa8e0bb01ce41076ee31686f0514a9e339" uuid = "9f842d2f-2579-4b1d-911e-f412cf18a3f5" -version = "0.6.18" +version = "1.1.1" [deps.SparseConnectivityTracer.extensions] - SparseConnectivityTracerDataInterpolationsExt = "DataInterpolations" + SparseConnectivityTracerChainRulesCoreExt = "ChainRulesCore" SparseConnectivityTracerLogExpFunctionsExt = "LogExpFunctions" SparseConnectivityTracerNNlibExt = "NNlib" SparseConnectivityTracerNaNMathExt = "NaNMath" SparseConnectivityTracerSpecialFunctionsExt = "SpecialFunctions" [deps.SparseConnectivityTracer.weakdeps] - DataInterpolations = "82cc6244-b520-54b8-b5a6-8a565e85f1d0" + ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" LogExpFunctions = "2ab3a3ac-af41-5b50-aa03-7779005ae688" NNlib = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" NaNMath = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" @@ -1634,15 +1732,17 @@ version = "0.6.18" [[deps.SparseMatrixColorings]] deps = ["ADTypes", "DocStringExtensions", "LinearAlgebra", "PrecompileTools", "Random", "SparseArrays"] -git-tree-sha1 = "ab958b4fec46d1f1d057bb8e2a99bfdb90744646" +git-tree-sha1 = "d3f3b7bb8a561b5ff20ee7cf9574841ee4e4e137" uuid = "0a514795-09f3-496d-8182-132a7b665d35" -version = "0.4.20" +version = "0.4.22" [deps.SparseMatrixColorings.extensions] + SparseMatrixColoringsCUDAExt = "CUDA" SparseMatrixColoringsCliqueTreesExt = "CliqueTrees" SparseMatrixColoringsColorsExt = "Colors" [deps.SparseMatrixColorings.weakdeps] + CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" CliqueTrees = "60701a23-6482-424a-84db-faee86b9b1f8" Colors = "5ae59095-9a9b-59fe-a467-6f913c188581" @@ -1653,9 +1753,9 @@ version = "0.1.6" [[deps.SpecialFunctions]] deps = ["IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "41852b8679f78c8d8961eeadc8f62cef861a52e3" +git-tree-sha1 = "f2685b435df2613e25fc10ad8c26dddb8640f547" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.5.1" +version = "2.6.1" weakdeps = ["ChainRulesCore"] [deps.SpecialFunctions.extensions] @@ -1674,9 +1774,9 @@ uuid = "cae243ae-269e-4f55-b966-ac2d0dc13c15" version = "0.1.2" [[deps.StaticArraysCore]] -git-tree-sha1 = "192954ef1208c7019899fbf8049e717f92959682" +git-tree-sha1 = "6ab403037779dae8c514bad259f32a447262455a" uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" -version = "1.4.3" +version = "1.4.4" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1691,15 +1791,15 @@ version = "1.7.1" [[deps.StatsBase]] deps = ["AliasTables", "DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "b81c5035922cc89c2d9523afc6c54be512411466" +git-tree-sha1 = "a136f98cefaf3e2924a66bd75173d1c891ab7453" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.34.5" +version = "0.34.7" [[deps.StatsFuns]] deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] -git-tree-sha1 = "8e45cecc66f3b42633b8ce14d431e8e57a3e242e" +git-tree-sha1 = "91f091a8716a6bb38417a6e6f274602a19aaa685" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "1.5.0" +version = "1.5.2" weakdeps = ["ChainRulesCore", "InverseFunctions"] [deps.StatsFuns.extensions] @@ -1712,12 +1812,6 @@ git-tree-sha1 = "b765e46ba27ecf6b44faf70df40c57aa3a547dcb" uuid = "69024149-9ee7-55f6-a4c4-859efe599b68" version = "0.3.7" -[[deps.StringManipulation]] -deps = ["PrecompileTools"] -git-tree-sha1 = "725421ae8e530ec29bcbdddbe91ff8053421d023" -uuid = "892a3eda-7b42-436c-8928-eab12a02cf0e" -version = "0.4.1" - [[deps.StructTypes]] deps = ["Dates", "UUIDs"] git-tree-sha1 = "159331b30e94d7b11379037feeb9b690950cace8" @@ -1734,10 +1828,16 @@ uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" version = "7.2.1+1" [[deps.SymbolicIndexingInterface]] -deps = ["Accessors", "ArrayInterface", "PrettyTables", "RuntimeGeneratedFunctions", "StaticArraysCore"] -git-tree-sha1 = "b6a641e38efa01355aa721246dd246e10c7dcd4d" +deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"] +git-tree-sha1 = "94c58884e013efff548002e8dc2fdd1cb74dfce5" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.3.40" +version = "0.3.46" + + [deps.SymbolicIndexingInterface.extensions] + SymbolicIndexingInterfacePrettyTablesExt = "PrettyTables" + + [deps.SymbolicIndexingInterface.weakdeps] + PrettyTables = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" [[deps.TOML]] deps = ["Dates"] @@ -1752,9 +1852,9 @@ version = "1.0.1" [[deps.Tables]] deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "OrderedCollections", "TableTraits"] -git-tree-sha1 = "598cd7c1f68d1e205689b1c2fe65a9f85846f297" +git-tree-sha1 = "f2c1efbc8f3a609aadf318094f8fc5204bdaf344" uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" -version = "1.12.0" +version = "1.12.1" [[deps.Tar]] deps = ["ArgTools", "SHA"] @@ -1796,25 +1896,28 @@ version = "0.11.3" [[deps.Tulip]] deps = ["CodecBzip2", "CodecZlib", "Krylov", "LDLFactorizations", "LinearAlgebra", "LinearOperators", "Logging", "MathOptInterface", "Printf", "QPSReader", "SparseArrays", "SuiteSparse", "TOML", "Test", "TimerOutputs"] -git-tree-sha1 = "ae2d50c166b10d2959386cef05c92d6a61f0c0e4" +git-tree-sha1 = "d9415a833b926da3f753133a50d5ce316c51bc67" uuid = "6dd1b50a-3aae-11e9-10b5-ef983d2400fa" -version = "0.9.7" +version = "0.9.8" [[deps.TypeUtils]] -deps = ["Requires"] -git-tree-sha1 = "3454a2c73f310eb932ac472bf60bd7160ad230df" +deps = ["LinearAlgebra", "Requires"] +git-tree-sha1 = "99c80f6db951c7fbb881f3e830ffa6038f08b6e6" uuid = "c3b1956e-8857-4d84-9b79-890df85b1e67" -version = "1.7.1" -weakdeps = ["OffsetArrays", "Unitful"] +version = "1.12.0" [deps.TypeUtils.extensions] TypeUtilsOffsetArraysExt = "OffsetArrays" TypeUtilsUnitfulExt = "Unitful" + [deps.TypeUtils.weakdeps] + OffsetArrays = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" + Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d" + [[deps.URIs]] -git-tree-sha1 = "cbbebadbcc76c5ca1cc4b4f3b0614b3e603b5000" +git-tree-sha1 = "bef26fb046d031353ef97a82e3fdb6afe7f21b1a" uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" -version = "1.5.2" +version = "1.6.1" [[deps.UUIDs]] deps = ["Random", "SHA"] @@ -1834,22 +1937,10 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" -[[deps.Unitful]] -deps = ["Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "d62610ec45e4efeabf7032d67de2ffdea8344bed" -uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.22.1" -weakdeps = ["ConstructionBase", "InverseFunctions"] - - [deps.Unitful.extensions] - ConstructionBaseUnitfulExt = "ConstructionBase" - InverseFunctionsUnitfulExt = "InverseFunctions" - -[[deps.UnitfulLatexify]] -deps = ["LaTeXStrings", "Latexify", "Unitful"] -git-tree-sha1 = "af305cc62419f9bd61b6644d19170a4d258c7967" -uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" -version = "1.7.0" +[[deps.UnsafePointers]] +git-tree-sha1 = "c81331b3b2e60a982be57c046ec91f599ede674a" +uuid = "e17b2a0c-0bdf-430a-bd0c-3a23cae4ff39" +version = "1.0.0" [[deps.Unzip]] git-tree-sha1 = "ca0969166a028236229f63514992fc073799bb78" @@ -1868,16 +1959,10 @@ uuid = "a44049a8-05dd-5a78-86c9-5fde0876e88c" version = "1.3.243+0" [[deps.Wayland_jll]] -deps = ["Artifacts", "EpollShim_jll", "Expat_jll", "JLLWrappers", "Libdl", "Libffi_jll", "XML2_jll"] -git-tree-sha1 = "49be0be57db8f863a902d59c0083d73281ecae8e" +deps = ["Artifacts", "EpollShim_jll", "Expat_jll", "JLLWrappers", "Libdl", "Libffi_jll"] +git-tree-sha1 = "96478df35bbc2f3e1e791bc7a3d0eeee559e60e9" uuid = "a2964d1f-97da-50d4-b82a-358c7fce9d89" -version = "1.23.1+0" - -[[deps.Wayland_protocols_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "5db3e9d307d32baba7067b13fc7b5aa6edd4a19a" -uuid = "2381bf8a-dfd0-557d-9999-79630e7b1b91" -version = "1.36.0+0" +version = "1.24.0+0" [[deps.Weave]] deps = ["Base64", "Dates", "Highlights", "JSON", "Markdown", "Mustache", "Pkg", "Printf", "REPL", "RelocatableFolders", "Requires", "Serialization", "YAML"] @@ -1885,12 +1970,6 @@ git-tree-sha1 = "092217eb5443926d200ae9325f103906efbb68b1" uuid = "44d3d7a6-8a23-5bf8-98c5-b353f8df5ec9" version = "0.10.12" -[[deps.XML2_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "b8b243e47228b4a3877f1dd6aee0c5d56db7fcf4" -uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.13.6+1" - [[deps.XZ_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] git-tree-sha1 = "fee71455b0aaa3440dfdd54a9a36ccef829be7d4" @@ -1941,9 +2020,9 @@ version = "1.3.7+0" [[deps.Xorg_libXfixes_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"] -git-tree-sha1 = "9caba99d38404b285db8801d5c45ef4f4f425a6d" +git-tree-sha1 = "75e00946e43621e09d431d9b95818ee751e6b2ef" uuid = "d091e8ba-531a-589c-9de9-94069b037ed8" -version = "6.0.1+0" +version = "6.0.2+0" [[deps.Xorg_libXi_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libXext_jll", "Xorg_libXfixes_jll"] @@ -1983,39 +2062,39 @@ version = "1.1.3+0" [[deps.Xorg_xcb_util_cursor_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_jll", "Xorg_xcb_util_renderutil_jll"] -git-tree-sha1 = "04341cb870f29dcd5e39055f895c39d016e18ccd" +git-tree-sha1 = "9750dc53819eba4e9a20be42349a6d3b86c7cdf8" uuid = "e920d4aa-a673-5f3a-b3d7-f755a4d47c43" -version = "0.1.4+0" +version = "0.1.6+0" [[deps.Xorg_xcb_util_image_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"] -git-tree-sha1 = "0fab0a40349ba1cba2c1da699243396ff8e94b97" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_xcb_util_jll"] +git-tree-sha1 = "f4fc02e384b74418679983a97385644b67e1263b" uuid = "12413925-8142-5f55-bb0e-6d7ca50bb09b" -version = "0.4.0+1" +version = "0.4.1+0" [[deps.Xorg_xcb_util_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxcb_jll"] -git-tree-sha1 = "e7fd7b2881fa2eaa72717420894d3938177862d1" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxcb_jll"] +git-tree-sha1 = "68da27247e7d8d8dafd1fcf0c3654ad6506f5f97" uuid = "2def613f-5ad1-5310-b15b-b15d46f528f5" -version = "0.4.0+1" +version = "0.4.1+0" [[deps.Xorg_xcb_util_keysyms_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"] -git-tree-sha1 = "d1151e2c45a544f32441a567d1690e701ec89b00" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_xcb_util_jll"] +git-tree-sha1 = "44ec54b0e2acd408b0fb361e1e9244c60c9c3dd4" uuid = "975044d2-76e6-5fbe-bf08-97ce7c6574c7" -version = "0.4.0+1" +version = "0.4.1+0" [[deps.Xorg_xcb_util_renderutil_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"] -git-tree-sha1 = "dfd7a8f38d4613b6a575253b3174dd991ca6183e" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_xcb_util_jll"] +git-tree-sha1 = "5b0263b6d080716a02544c55fdff2c8d7f9a16a0" uuid = "0d47668e-0667-5a69-a72c-f761630bfb7e" -version = "0.3.9+1" +version = "0.3.10+0" [[deps.Xorg_xcb_util_wm_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"] -git-tree-sha1 = "e78d10aab01a4a154142c5006ed44fd9e8e31b67" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_xcb_util_jll"] +git-tree-sha1 = "f233c83cad1fa0e70b7771e0e21b061a116f2763" uuid = "c22f9ab0-d5fe-5066-847c-f4bb1cd4e361" -version = "0.4.1+1" +version = "0.4.2+0" [[deps.Xorg_xkbcomp_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxkbfile_jll"] @@ -2042,10 +2121,10 @@ uuid = "ddb6d928-2868-570f-bddf-ab3f9cf99eb6" version = "0.4.14" [[deps.ZMQ]] -deps = ["FileWatching", "PrecompileTools", "Sockets", "ZeroMQ_jll"] -git-tree-sha1 = "33333bdded3835f81b9b6353da9243dc4ec62e0f" +deps = ["FileWatching", "PrecompileTools", "Printf", "Sockets", "ZeroMQ_jll"] +git-tree-sha1 = "c398a0a905ed975308b433f013af388b65b10cb6" uuid = "c2297ded-f4af-51ae-bb23-16f91089e4e1" -version = "1.4.0" +version = "1.5.0" [[deps.ZeroMQ_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "libsodium_jll"] @@ -2065,10 +2144,10 @@ uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" version = "1.5.7+1" [[deps.eudev_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "gperf_jll"] -git-tree-sha1 = "431b678a28ebb559d224c0b6b6d01afce87c51ba" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "c3b0e6196d50eab0c5ed34021aaa0bb463489510" uuid = "35ca27e7-8b34-5b7f-bca9-bdc33f59eb06" -version = "3.2.9+0" +version = "3.2.14+0" [[deps.fzf_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -2076,23 +2155,17 @@ git-tree-sha1 = "b6a34e0e0960190ac2a4363a1bd003504772d631" uuid = "214eeab7-80f7-51ab-84ad-2988db7cef09" version = "0.61.1+0" -[[deps.gperf_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "3cad2cf2c8d80f1d17320652b3ea7778b30f473f" -uuid = "1a1c6b14-54f6-533d-8383-74cd7377aa70" -version = "3.3.0+0" - [[deps.libaom_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "522c1df09d05a71785765d19c9524661234738e9" +git-tree-sha1 = "371cc681c00a3ccc3fbc5c0fb91f58ba9bec1ecf" uuid = "a4ae2306-e953-59d6-aa16-d00cac43593b" -version = "3.11.0+0" +version = "3.13.1+0" [[deps.libass_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Zlib_jll"] -git-tree-sha1 = "e17c115d55c5fbb7e52ebedb427a0dca79d4484e" +git-tree-sha1 = "125eedcb0a4a0bba65b657251ce1d27c8714e9d6" uuid = "0ac62f75-1d6f-5e53-bd7c-93b484bb37c0" -version = "0.15.2+0" +version = "0.17.4+0" [[deps.libblastrampoline_jll]] deps = ["Artifacts", "Libdl"] @@ -2106,28 +2179,28 @@ uuid = "1183f4f0-6f2a-5f1a-908b-139f9cdfea6f" version = "0.2.2+0" [[deps.libevdev_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "141fe65dc3efabb0b1d5ba74e91f6ad26f84cc22" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "56d643b57b188d30cccc25e331d416d3d358e557" uuid = "2db6ffa8-e38f-5e21-84af-90c45d0032cc" -version = "1.11.0+0" +version = "1.13.4+0" [[deps.libfdk_aac_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "8a22cf860a7d27e4f3498a0fe0811a7957badb38" +git-tree-sha1 = "646634dd19587a56ee2f1199563ec056c5f228df" uuid = "f638f0a6-7fb0-5443-88ba-1cc74229b280" -version = "2.0.3+0" +version = "2.0.4+0" [[deps.libinput_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "eudev_jll", "libevdev_jll", "mtdev_jll"] -git-tree-sha1 = "ad50e5b90f222cfe78aa3d5183a20a12de1322ce" +deps = ["Artifacts", "JLLWrappers", "Libdl", "eudev_jll", "libevdev_jll", "mtdev_jll"] +git-tree-sha1 = "91d05d7f4a9f67205bd6cf395e488009fe85b499" uuid = "36db933b-70db-51c0-b978-0f229ee0e533" -version = "1.18.0+0" +version = "1.28.1+0" [[deps.libpng_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"] -git-tree-sha1 = "002748401f7b520273e2b506f61cab95d4701ccf" +git-tree-sha1 = "07b6a107d926093898e82b3b1db657ebe33134ec" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" -version = "1.6.48+0" +version = "1.6.50+0" [[deps.libsodium_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -2136,16 +2209,22 @@ uuid = "a9144af2-ca23-56d9-984f-0d03f7b5ccf8" version = "1.0.21+0" [[deps.libvorbis_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] -git-tree-sha1 = "490376214c4721cdaca654041f635213c6165cb3" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll"] +git-tree-sha1 = "11e1772e7f3cc987e9d3de991dd4f6b2602663a5" uuid = "f27f6e37-5d2b-51aa-960f-b287f2bc3b7a" -version = "1.3.7+2" +version = "1.3.8+0" + +[[deps.micromamba_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl"] +git-tree-sha1 = "2ca2ac0b23a8e6b76752453e08428b3b4de28095" +uuid = "f8abcde7-e9b7-5caa-b8af-a437887ae8e4" +version = "1.5.12+0" [[deps.mtdev_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "814e154bdb7be91d78b6802843f76b6ece642f11" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "b4d631fd51f2e9cdd93724ae25b2efc198b059b1" uuid = "009596ad-96f7-51b1-9f1b-5ce2d5e8a71e" -version = "1.1.6+0" +version = "1.1.7+0" [[deps.nghttp2_jll]] deps = ["Artifacts", "Libdl"] @@ -2157,20 +2236,26 @@ deps = ["Artifacts", "Libdl"] uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0" version = "17.4.0+2" +[[deps.pixi_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl"] +git-tree-sha1 = "f349584316617063160a947a82638f7611a8ef0f" +uuid = "4d7b5844-a134-5dcd-ac86-c8f19cd51bed" +version = "0.41.3+0" + [[deps.x264_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4fea590b89e6ec504593146bf8b988b2c00922b2" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "14cc7083fc6dff3cc44f2bc435ee96d06ed79aa7" uuid = "1270edf5-f2f9-52d2-97e9-ab00b5d0237a" -version = "2021.5.5+0" +version = "10164.0.1+0" [[deps.x265_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "ee567a171cce03570d77ad3a43e90218e38937a9" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "e7b67590c14d487e734dcb925924c5dc43ec85f3" uuid = "dfaa095f-4041-5dcd-9319-2fabd8486b76" -version = "3.5.0+0" +version = "4.1.0+0" [[deps.xkbcommon_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Wayland_jll", "Wayland_protocols_jll", "Xorg_libxcb_jll", "Xorg_xkeyboard_config_jll"] -git-tree-sha1 = "c950ae0a3577aec97bfccf3381f66666bc416729" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxcb_jll", "Xorg_xkeyboard_config_jll"] +git-tree-sha1 = "fbf139bce07a534df0e699dbb5f5cc9346f95cc1" uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd" -version = "1.8.1+0" +version = "1.9.2+0" diff --git a/benchmarks/GlobalOptimization/Project.toml b/benchmarks/GlobalOptimization/Project.toml index b71acc457..af07512d3 100644 --- a/benchmarks/GlobalOptimization/Project.toml +++ b/benchmarks/GlobalOptimization/Project.toml @@ -10,6 +10,8 @@ OptimizationNOMAD = "2cab0595-8222-4775-b714-9828e6a9e01b" OptimizationOptimJL = "36348300-93cb-4f02-beb5-3c3902f8871e" OptimizationOptimisers = "42dfb2eb-d2b4-4451-abcd-913932933ac1" OptimizationPRIMA = "72f8369c-a2ea-4298-9126-56167ce9cbc2" +OptimizationPyCMA = "fb0822aa-1fe5-41d8-99a6-e7bf6c238d3b" +OptimizationSciPy = "cce07bd8-c79b-4b00-aee8-8db9cce22837" Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" SciMLBenchmarks = "31c91b34-3c75-11e9-0341-95557aab0344" @@ -25,5 +27,7 @@ OptimizationNOMAD = "0.3" OptimizationOptimJL = "0.4" OptimizationOptimisers = "0.3" OptimizationPRIMA = "0.3" +OptimizationPyCMA = "1" +OptimizationSciPy = "0.4.1" Plots = "1.4" SciMLBenchmarks = "0.1" diff --git a/benchmarks/GlobalOptimization/blackbox_global_optimizers.jmd b/benchmarks/GlobalOptimization/blackbox_global_optimizers.jmd index de86fc0ef..7a3a450ad 100644 --- a/benchmarks/GlobalOptimization/blackbox_global_optimizers.jmd +++ b/benchmarks/GlobalOptimization/blackbox_global_optimizers.jmd @@ -18,8 +18,7 @@ import BlackBoxOptimizationBenchmarking.Chain const BBOB = BlackBoxOptimizationBenchmarking using OptimizationBBO, OptimizationOptimJL, OptimizationEvolutionary, OptimizationNLopt -using OptimizationMetaheuristics, OptimizationNOMAD, OptimizationPRIMA, - OptimizationOptimisers +using OptimizationMetaheuristics, OptimizationNOMAD, OptimizationPRIMA, OptimizationOptimisers, OptimizationSciPy, OptimizationPyCMA ``` ```julia @@ -59,9 +58,17 @@ setup = Dict( #"BBO_dxnes" => chain(BBO_dxnes(), isboxed=true), "OptimizationMetaheuristics.ECA" => chain(OptimizationMetaheuristics.ECA(), isboxed = true), #"OptimizationMetaheuristics.CGSA" => () -> chain(OptimizationMetaheuristics.CGSA(), isboxed=true), #give me strange results - "OptimizationMetaheuristics.DE" => chain(OptimizationMetaheuristics.DE(), isboxed = true), - "Optimisers.AdamW" => chain(Optimisers.AdamW(), isboxed = false), - "Optimisers.RMSProp" => chain(Optimisers.RMSProp(), isboxed = false) # "NOMADOpt" => chain(NOMADOpt()), too much printing + "OptimizationMetaheuristics.DE" => chain(OptimizationMetaheuristics.DE(), isboxed=true), + "Optimisers.AdamW" => chain(Optimisers.AdamW(), isboxed=false), + "Optimisers.RMSProp" => chain(Optimisers.RMSProp(), isboxed=false), + # SciPy global optimizers + "ScipyDifferentialEvolution" => chain(ScipyDifferentialEvolution(), isboxed=true), + #"ScipyBasinhopping" => chain(ScipyBasinhopping(), isboxed=true), + "ScipyDualAnnealing" => chain(ScipyDualAnnealing(), isboxed=true), + "ScipyShgo" => chain(ScipyShgo(), isboxed=true), + "ScipyDirect" => chain(ScipyDirect(), isboxed=true), + "ScipyBrute" => chain(ScipyBrute(), isboxed=true), + # "NOMADOpt" => chain(NOMADOpt()), too much printing # "OptimizationPRIMA.UOBYQA()" => chain(OptimizationPRIMA.UOBYQA()), :StackOverflowError? # "OptimizationPRIMA.NEWUOA()" => OptimizationPRIMA.UOBYQA(), #