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ChrisRackauckasChrisRackauckas
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First version of SciMLStructures
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‎.JuliaFormatter.toml‎

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style = "sciml"
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format_markdown = true
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annotate_untyped_fields_with_any = false

‎.github/dependabot.yml‎

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# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates
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version: 2
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updates:
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- package-ecosystem: "github-actions"
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directory: "/" # Location of package manifests
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schedule:
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interval: "weekly"

‎.github/workflows/CI.yml‎

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name: CI
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on:
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pull_request:
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branches:
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- main
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paths-ignore:
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- 'docs/**'
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push:
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branches:
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- main
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paths-ignore:
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- 'docs/**'
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jobs:
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test:
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runs-on: ubuntu-latest
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strategy:
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fail-fast: false
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matrix:
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group:
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- Core
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version:
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- '1'
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- '1.6'
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steps:
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- uses: actions/checkout@v4
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- uses: julia-actions/setup-julia@v1
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with:
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version: ${{ matrix.version }}
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- uses: actions/cache@v3
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env:
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cache-name: cache-artifacts
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with:
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path: ~/.julia/artifacts
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key: ${{ runner.os }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }}
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restore-keys: |
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${{ runner.os }}-test-${{ env.cache-name }}-
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${{ runner.os }}-test-
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${{ runner.os }}-
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- uses: julia-actions/julia-buildpkg@v1
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- uses: julia-actions/julia-runtest@v1
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env:
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GROUP: ${{ matrix.group }}
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- uses: julia-actions/julia-processcoverage@v1
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with:
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directories: src,ext
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- uses: codecov/codecov-action@v3
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with:
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files: lcov.info

‎.github/workflows/CompatHelper.yml‎

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name: CompatHelper
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on:
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schedule:
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- cron: 0 0 * * *
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workflow_dispatch:
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jobs:
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CompatHelper:
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runs-on: ubuntu-latest
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steps:
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- name: Pkg.add("CompatHelper")
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run: julia -e 'using Pkg; Pkg.add("CompatHelper")'
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- name: CompatHelper.main()
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env:
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GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
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COMPATHELPER_PRIV: ${{ secrets.DOCUMENTER_KEY }}
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run: julia -e 'using CompatHelper; CompatHelper.main(;subdirs=["", "docs"])'

‎.github/workflows/DocsPreviewCleanup.yml‎

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name: DocsPreviewCleanup
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on:
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pull_request:
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types: [closed]
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jobs:
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cleanup:
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runs-on: ubuntu-latest
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steps:
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- name: Checkout gh-pages branch
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uses: actions/checkout@v4
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with:
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ref: gh-pages
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- name: Delete preview and history + push changes
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run: |
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if [ -d "previews/PR$PRNUM" ]; then
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git config user.name "Documenter.jl"
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git config user.email "[email protected]"
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git rm -rf "previews/PR$PRNUM"
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git commit -m "delete preview"
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git branch gh-pages-new $(echo "delete history" | git commit-tree HEAD^{tree})
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git push --force origin gh-pages-new:gh-pages
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fi
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env:
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PRNUM: ${{ github.event.number }}

‎.github/workflows/Documentation.yml‎

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name: Documentation
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on:
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push:
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branches:
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- main
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- 'release-'
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tags: '*'
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pull_request:
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jobs:
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build:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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- uses: julia-actions/setup-julia@latest
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with:
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version: '1'
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- name: Install dependencies
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run: julia --project=docs/ -e 'using Pkg; Pkg.develop(PackageSpec(path=pwd())); Pkg.instantiate()'
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- name: Build and deploy
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env:
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GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} # For authentication with GitHub Actions token
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DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }} # For authentication with SSH deploy key
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run: julia --project=docs/ --code-coverage=user docs/make.jl
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- uses: julia-actions/julia-processcoverage@v1
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with:
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directories: src
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- uses: codecov/codecov-action@v3
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with:
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files: lcov.info

‎.github/workflows/Downstream.yml‎

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name: IntegrationTest
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on:
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push:
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branches: [main]
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tags: [v*]
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pull_request:
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jobs:
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test:
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name: ${{ matrix.package.repo }}/${{ matrix.package.group }}/${{ matrix.julia-version }}
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runs-on: ${{ matrix.os }}
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env:
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GROUP: ${{ matrix.package.group }}
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strategy:
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matrix:
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julia-version: [1,1.6]
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os: [ubuntu-latest]
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package:
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- {user: SciML, repo: SciMLBase.jl, group: Core}
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steps:
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- uses: actions/checkout@v4
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- uses: julia-actions/setup-julia@v1
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with:
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version: ${{ matrix.julia-version }}
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arch: x64
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- uses: julia-actions/julia-buildpkg@latest
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- name: Clone Downstream
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uses: actions/checkout@v4
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with:
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repository: ${{ matrix.package.user }}/${{ matrix.package.repo }}
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path: downstream
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- name: Load this and run the downstream tests
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shell: julia --color=yes --project=downstream {0}
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run: |
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using Pkg
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try
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# force it to use this PR's version of the package
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Pkg.develop(PackageSpec(path=".")) # resolver may fail with main deps
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Pkg.update()
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Pkg.test(coverage=true) # resolver may fail with test time deps
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catch err
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err isa Pkg.Resolve.ResolverError || rethrow()
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# If we can't resolve that means this is incompatible by SemVer and this is fine
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# It means we marked this as a breaking change, so we don't need to worry about
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# Mistakenly introducing a breaking change, as we have intentionally made one
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@info "Not compatible with this release. No problem." exception=err
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exit(0) # Exit immediately, as a success
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end
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- uses: julia-actions/julia-processcoverage@v1
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- uses: codecov/codecov-action@v3
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with:
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file: lcov.info

‎.github/workflows/FormatCheck.yml‎

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name: format-check
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on:
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push:
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branches:
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- 'main'
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- 'release-'
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tags: '*'
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pull_request:
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jobs:
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build:
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runs-on: ${{ matrix.os }}
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strategy:
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matrix:
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julia-version: [1]
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julia-arch: [x86]
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os: [ubuntu-latest]
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steps:
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- uses: julia-actions/setup-julia@latest
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with:
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version: ${{ matrix.julia-version }}
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- uses: actions/checkout@v4
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- name: Install JuliaFormatter and format
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# This will use the latest version by default but you can set the version like so:
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#
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# julia -e 'using Pkg; Pkg.add(PackageSpec(name="JuliaFormatter", version="0.13.0"))'
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run: |
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julia -e 'using Pkg; Pkg.add(PackageSpec(name="JuliaFormatter"))'
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julia -e 'using JuliaFormatter; format(".", verbose=true)'
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- name: Format check
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run: |
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julia -e '
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out = Cmd(`git diff --name-only`) |> read |> String
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if out == ""
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exit(0)
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else
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@error "Some files have not been formatted !!!"
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write(stdout, out)
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exit(1)
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end'

‎.github/workflows/Invalidations.yml‎

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name: Invalidations
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on:
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pull_request:
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concurrency:
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# Skip intermediate builds: always.
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# Cancel intermediate builds: always.
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group: ${{ github.workflow }}-${{ github.ref }}
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cancel-in-progress: true
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jobs:
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evaluate:
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# Only run on PRs to the default branch.
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# In the PR trigger above branches can be specified only explicitly whereas this check should work for master, main, or any other default branch
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if: github.base_ref == github.event.repository.default_branch
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runs-on: ubuntu-latest
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steps:
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- uses: julia-actions/setup-julia@v1
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with:
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version: '1'
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- uses: actions/checkout@v4
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- uses: julia-actions/julia-buildpkg@v1
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- uses: julia-actions/julia-invalidations@v1
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id: invs_pr
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- uses: actions/checkout@v4
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with:
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ref: ${{ github.event.repository.default_branch }}
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- uses: julia-actions/julia-buildpkg@v1
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- uses: julia-actions/julia-invalidations@v1
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id: invs_default
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- name: Report invalidation counts
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run: |
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echo "Invalidations on default branch: ${{ steps.invs_default.outputs.total }} (${{ steps.invs_default.outputs.deps }} via deps)" >> $GITHUB_STEP_SUMMARY
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echo "This branch: ${{ steps.invs_pr.outputs.total }} (${{ steps.invs_pr.outputs.deps }} via deps)" >> $GITHUB_STEP_SUMMARY
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- name: Check if the PR does increase number of invalidations
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if: steps.invs_pr.outputs.total > steps.invs_default.outputs.total
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run: exit 1

‎.github/workflows/TagBot.yml‎

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name: TagBot
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on:
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issue_comment:
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types:
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- created
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workflow_dispatch:
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jobs:
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TagBot:
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if: github.event_name == 'workflow_dispatch' || github.actor == 'JuliaTagBot'
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runs-on: ubuntu-latest
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steps:
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- uses: JuliaRegistries/TagBot@v1
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with:
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token: ${{ secrets.GITHUB_TOKEN }}
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ssh: ${{ secrets.DOCUMENTER_KEY }}

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