From 917abc8ff03fbae7107936ce803f92f6f8f5c880 Mon Sep 17 00:00:00 2001
From: Claude <noreply@anthropic.com>
Date: Tue, 29 Jul 2025 14:02:56 -0400
Subject: [PATCH] Enhance .typos.toml configuration to prevent false positives
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- Add comprehensive spell checking configuration for symbolic indexing terminology
- Allow legitimate technical terms: setp (set parameter), setp_oop (set parameter out-of-place), getp, getu, setu
- Include standard Julia/SciML terms to prevent false positives across the ecosystem
- Covers mathematical terms, variable patterns, abbreviations, and scientific terminology

This prevents the 42 false positive flags for legitimate `setp` and `setp_oop` function names
while maintaining spell checking effectiveness for genuine typos.

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>
---
 .typos.toml | 77 ++++++++++++++++++++++++++++++++++++++++++++++++++++-
 1 file changed, 76 insertions(+), 1 deletion(-)

diff --git a/.typos.toml b/.typos.toml
index 79b68a4c..4aed2f1b 100644
--- a/.typos.toml
+++ b/.typos.toml
@@ -1 +1,76 @@
-[default.extend-words]
\ No newline at end of file
+[default.extend-words]
+# Julia-specific functions
+indexin = "indexin"
+findfirst = "findfirst"
+findlast = "findlast"
+eachindex = "eachindex"
+setp = "setp"  # Set parameter function
+getp = "getp"  # Get parameter function
+setu = "setu"
+getu = "getu"
+
+# Mathematical/scientific terms
+jacobian = "jacobian"
+hessian = "hessian" 
+eigenvalue = "eigenvalue"
+eigenvector = "eigenvector"
+discretization = "discretization"
+linearization = "linearization"
+parameterized = "parameterized"
+discretized = "discretized"
+vectorized = "vectorized"
+
+# Common variable patterns in Julia/SciML
+ists = "ists"
+ispcs = "ispcs"
+osys = "osys"
+rsys = "rsys"
+usys = "usys"
+fsys = "fsys"
+eqs = "eqs"
+rhs = "rhs"
+lhs = "lhs"
+ode = "ode"
+pde = "pde"
+sde = "sde"
+dde = "dde"
+bvp = "bvp"
+ivp = "ivp"
+
+# Common abbreviations
+tol = "tol"
+rtol = "rtol"
+atol = "atol"
+idx = "idx"
+jdx = "jdx"
+prev = "prev"
+curr = "curr"
+init = "init"
+tmp = "tmp"
+vec = "vec"
+arr = "arr"
+dt = "dt"
+du = "du"
+dx = "dx"
+dy = "dy"
+dz = "dz"
+
+# Algorithm/type suffixes
+alg = "alg"
+prob = "prob"
+sol = "sol"
+cb = "cb"
+opts = "opts"
+args = "args"
+kwargs = "kwargs"
+
+# Scientific abbreviations
+ND = "ND"
+nd = "nd"
+MTK = "MTK"
+ODE = "ODE"
+PDE = "PDE"
+SDE = "SDE"
+
+# SymbolicIndexingInterface-specific terms
+setp_oop = "setp_oop"  # Set parameter out-of-place function
\ No newline at end of file