Bump the actions group across 1 directory with 3 updates (#225)

Bumps the actions group with 3 updates in the / directory: [actions/checkout](https://github.com/actions/checkout), [scitools/workflows](https://github.com/scitools/workflows) and [actions/stale](https://github.com/actions/stale).


Updates `actions/checkout` from 4 to 5
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](actions/checkout@v4...v5)

Updates `scitools/workflows` from 2025.07.3 to 2025.09.3
- [Release notes](https://github.com/scitools/workflows/releases)
- [Commits](SciTools/workflows@2025.07.3...2025.09.3)

Updates `actions/stale` from 9 to 10
- [Release notes](https://github.com/actions/stale/releases)
- [Changelog](https://github.com/actions/stale/blob/main/CHANGELOG.md)
- [Commits](actions/stale@v9...v10)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-version: '5'
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: actions
- dependency-name: scitools/workflows
  dependency-version: 2025.09.3
  dependency-type: direct:production
  dependency-group: actions
- dependency-name: actions/stale
  dependency-version: '10'
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: actions
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

Author: dependabot[bot]

.github/workflows/ci-citation.yml

@@ -20,7 +20,7 @@ jobs:
     name: "validate"
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
         with:
           fetch-depth: 0
 

.github/workflows/ci-docs.yml

@@ -18,7 +18,7 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v4
+    - uses: actions/checkout@v5
 
     - uses: actions/cache@v4
       with:

.github/workflows/ci-manifest.yml

@@ -23,4 +23,4 @@ concurrency:
 jobs:
   manifest:
     name: "check-manifest"
-    uses: scitools/workflows/.github/workflows/ci-manifest.yml@2025.07.3
+    uses: scitools/workflows/.github/workflows/ci-manifest.yml@2025.09.3

.github/workflows/ci-template-check.yml

@@ -10,7 +10,7 @@ on:
 
 jobs:
   prompt-share:
-    uses: scitools/workflows/.github/workflows/ci-template-check.yml@2025.07.3
+    uses: scitools/workflows/.github/workflows/ci-template-check.yml@2025.09.3
     secrets: inherit
     with:
       pr_number: ${{ github.event.pull_request.number }}

.github/workflows/ci-tests.yml

@@ -29,7 +29,7 @@ jobs:
             coverage: "--cov-report= --cov=tephi"
 
     steps:
-    - uses: actions/checkout@v4
+    - uses: actions/checkout@v5
 
     - uses: actions/cache@v4
       with:

.github/workflows/stale.yml

@@ -17,7 +17,7 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-      - uses: actions/stale@v9
+      - uses: actions/stale@v10
         with:
           repo-token: ${{ secrets.GITHUB_TOKEN }}