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I just tested a 2.3.80 airgap installation and can confirm that it upgraded successfully using the securityonion-2.3.90-20211213 ISO image. The python36-lxml package was automatically installed and so-allow works properly.

You might try a test installation of 2.3.80 in your environment and then updating it to 2.3.90 to then compare to your existing deployment.

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Answer selected by dougburks
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