NAMESPACE

useDynLib(EDDA)
export(generateData,testDATs,computeAUC,plotROC,plotPRC)
importClassesFrom(methods, character, data.frame, matrix, numeric) 
importMethodsFrom(baySeq, rbind) 
importMethodsFrom(ROCR, plot) 
importFrom(baySeq, getLibsizes, getLikelihoods.NB, getPriors.NB,
           topCounts)
import(DESeq) 
importFrom(edgeR, calcNormFactors, commonCondLogLikDerDelta, DGEList,
           estimateCommonDisp, estimateTagwiseDisp, exactTest,
           exactTestByDeviance, exactTestBySmallP, exactTestDoubleTail,
           getDispersion, mglmOneGroup, splitIntoGroups, topTags) 
importFrom(graphics, abline, axis, barplot, box, legend, lines, mtext,
           par, points, rect, text)
importFrom(methods, is, new)
importFrom(parallel, mclapply)
importFrom(ROCR, performance, prediction) 
importFrom(snow, makeCluster, stopCluster) 
importFrom(stats, chisq.test, embed, fisher.test, optimize, p.adjust,
           rgamma, rmultinom, rnbinom, rnorm, runif, smooth.spline,
           supsmu, wilcox.test)
importFrom(utils, combn, read.delim, read.table)