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lines changed Original file line number Diff line number Diff line change 11Sphinx == 4.1.2
22sphinx-autobuild == 2021.3.14
3- myst-parser == 0.15.2
4- numpy >= 1.21.6
5- matplotlib == 3.3.4
6- ipywidgets == 7.6.4
7- pandas == 1.1.5
8- nbclient == 0.5.4
9- myst-nb == 0.13.0
3+ myst-nb == 0.17.2 # this version is fine in python 3.8 and avoids pulling in multiple nbformat packages
4+ myst-parser == 0.18.0
5+ lxml_html_clean # needed by myst-nb
6+ #numpy>=1.21.6
7+ #matplotlib==3.3.4
8+ #pandas==1.1.5
109linkify-it-py == 1.0.1 # https://myst-parser.readthedocs.io/en/latest/syntax/optional.html?highlight=linkify#linkify
1110sphinx-togglebutton == 0.2.3
1211sphinx-copybutton == 0.4.0
@@ -18,17 +17,17 @@ ablog==0.10.19
1817docutils == 0.16 # 0.17 causes error. https://github.com/executablebooks/MyST-Parser/issues/343
1918pydata_sphinx_theme == 0.6.3
2019sphinxemoji == 0.1.8
21- scipy
22- scikit-image >= 0.17.2
23- plotly
24- nibabel >= 3.2.1
25- monai >= 1.0.0
20+ # scipy
21+ # scikit-image>=0.17.2
22+ # plotly
23+ # nibabel>=3.2.1
24+ # monai>=1.0.0
2625torch >= 1.12.0
27- numpy-stl >= 2.12.0
28- trimesh >= 3.8.11
29- pydicom
30- PyPDF2 >= 2.11.1
31- highdicom >= 0.18.2
26+ # numpy-stl>=2.12.0
27+ # trimesh>=3.8.11
28+ # pydicom
29+ # PyPDF2>=2.11.1
30+ # highdicom>=0.18.2
3231sphinx-autodoc-typehints == 1.12.0
3332sphinxcontrib-applehelp == 1.0.2
3433sphinxcontrib-devhelp == 1.0.2
@@ -37,4 +36,3 @@ sphinxcontrib-jsmath==1.0.1
3736sphinxcontrib-qthelp == 1.0.3
3837sphinxcontrib-serializinghtml == 1.1.5
3938sphinxcontrib-mermaid == 0.7.1
40- lxml_html_clean
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