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Updated default config values.
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4Pipe4rc

Lines changed: 4 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -37,7 +37,7 @@ Templates_path =
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[Variables]
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#Maximum percent of reads allowed so start with the same bases:
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max_equality = 30
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max_equality = 40
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#Minimum length of sequences not to be discarded by seqclean:
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min_len = 50
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#Number of CPU cores to be used by seqclean, BLAST and mira:
@@ -55,12 +55,12 @@ min_ssr_qual = 70
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#mirajob = job = est,denovo,accurate
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#miracommon = parameters = COMMON_SETTINGS -AS:nop=5:ugpf=off -CO:mr=on:asir=on
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#mira454 = 454_SETTINGS -AL:egp=off -ED:ace=on -CL:cpat=on -CO:mrpg=3
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#mirareadgroup = readgroup = 454_EST_data_from_cobig2
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#mira454 = 454_SETTINGS -AL:egp=off -CL:cpat=on
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#mirareadgroup = readgroup = Test data
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#miratech = technology = 454
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mirajob =
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miracommon =
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mira454 =
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mirareadgroup =
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miratech =
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miratech =

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