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lines changed Original file line number Diff line number Diff line change @@ -37,7 +37,7 @@ Templates_path =
3737
3838[Variables]
3939#Maximum percent of reads allowed so start with the same bases:
40- max_equality = 30
40+ max_equality = 40
4141#Minimum length of sequences not to be discarded by seqclean:
4242min_len = 50
4343#Number of CPU cores to be used by seqclean, BLAST and mira:
@@ -55,12 +55,12 @@ min_ssr_qual = 70
5555
5656#mirajob = job = est,denovo,accurate
5757#miracommon = parameters = COMMON_SETTINGS -AS:nop=5:ugpf=off -CO:mr=on:asir=on
58- #mira454 = 454_SETTINGS -AL:egp=off -ED:ace=on - CL:cpat=on -CO:mrpg=3
59- #mirareadgroup = readgroup = 454_EST_data_from_cobig2
58+ #mira454 = 454_SETTINGS -AL:egp=off -CL:cpat=on
59+ #mirareadgroup = readgroup = Test data
6060#miratech = technology = 454
6161
6262mirajob =
6363miracommon =
6464mira454 =
6565mirareadgroup =
66- miratech =
66+ miratech =
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