Various fixes

Author: YoanSallami

README.md

@@ -9,7 +9,7 @@
 
 <div align="center">
 
-![Alpha](https://img.shields.io/badge/Release-Alpha-orange.svg)
+![Beta](https://img.shields.io/badge/Release-Beta-blue.svg)
 [![Discord](https://img.shields.io/discord/1118241178723291219)](https://discord.gg/82nt97uXcM)
 [![Python package](https://github.com/SynaLinks/Synalinks/actions/workflows/tests.yml/badge.svg)](https://github.com/SynaLinks/SynaLinks/actions/workflows/tests.yml)
 [![License: Apache-2.0](https://img.shields.io/badge/License-Apache_2.0-green.svg)](https://opensource.org/license/apache-2-0)
@@ -236,9 +236,9 @@ program.summary()
 Or a plot (usefull to document your system):
 
 ```python
-filepath = synalinks.utils.plot_program(
+synalinks.utils.plot_program(
     program,
-    show_modules_names=True,
+    show_module_names=True,
     show_trainable=True,
     show_schemas=True,
 )

docs/index.md

@@ -193,9 +193,9 @@ program.summary()
 Or a plot (usefull to document your system):
 
 ```python
-filepath = synalinks.utils.plot_program(
+synalinks.utils.plot_program(
     program,
-    show_modules_names=True,
+    show_module_names=True,
     show_trainable=True,
     show_schemas=True,
 )

notebooks/conversational_applications.py

@@ -8,7 +8,7 @@
 def _():
     import marimo as mo
     import synalinks
-
+    
     synalinks.backend.clear_session()
     return mo, synalinks
 
@@ -57,7 +57,7 @@ async def _(synalinks):
     _x1 = await synalinks.Generator(
         language_model=language_model,
         prompt_template=synalinks.chat_prompt_template(),
-        streaming=False,  # Marimo chat don't handle streaming yet
+        streaming=False, # Marimo chat don't handle streaming yet
     )(_x0)
 
     program = synalinks.Program(

notebooks/test_checkpoint.program.json

@@ -5,11 +5,13 @@ readme = "README.md"
 requires-python = ">=3.9"
 dynamic = ["version"]
 classifiers = [
-    "Development Status :: 1 - Beta",
+    "Development Status :: 4 - Beta",
     "Programming Language :: Python :: 3",
     "Programming Language :: Python :: 3.9",
     "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
+    "Programming Language :: Python :: 3.13",
     "Programming Language :: Python :: 3 :: Only",
     "Operating System :: Unix",
     "Operating System :: MacOS",
@@ -38,6 +40,13 @@ dependencies = [
     "nest-asyncio>=1.6.0",
 ]
 
+[project.urls]
+Homepage = "https://github.com/SynaLinks/synalinks"
+Issues = "https://github.com/SynaLinks/synalinks/issues"
+
+[tool.setuptools]
+license-files = []
+
 [tool.setuptools.dynamic]
 version = {attr = "synalinks.src.version.__version__"}
 

pyproject.toml

@@ -1,3 +1,5 @@
 #!/bin/bash
 set -Eeuo pipefail
 
+uv build
+uv publish

shell/publish.sh

@@ -1,4 +1,4 @@
-# Modified from: keras/src/backend/common/keras_tensor.py
+# Modified from: keras/src/backend/common/keras_tensor_test.py
 # Original authors: François Chollet et al. (Keras Team)
 # License Apache 2.0: (c) 2025 Yoan Sallami (Synalinks Team)
 

synalinks/src/backend/common/symbolic_data_model_test.py

@@ -1,4 +1,4 @@
-# Modified from: keras/src/callbacks/callback_list.py
+# Modified from: keras/src/callbacks/callback_test.py
 # Original authors: François Chollet et al. (Keras Team)
 # License Apache 2.0: (c) 2025 Yoan Sallami (Synalinks Team)
 

synalinks/src/callbacks/callback_test.py

@@ -1,5 +1,3 @@
-# Modified from: keras/src/initializers/initializer.py
-# Original authors: François Chollet et al. (Keras Team)
 # License Apache 2.0: (c) 2025 Yoan Sallami (Synalinks Team)
 
 from unittest.mock import patch

synalinks/src/language_models/language_model_test.py

@@ -1,3 +1,5 @@
+# License Apache 2.0: (c) 2025 Yoan Sallami (Synalinks Team)
+
 from synalinks.src import testing
 from synalinks.src.backend import DataModel
 from synalinks.src.modules.core.input_module import Input