updated install requirments and ensure packaging dependency

Author: bgoli

MANIFEST.in

@@ -1,6 +1,8 @@
 include LICENCE_GPLv3.txt
-include README.txt
+include README.md
+include RELEASES.md
+include CONTRIBUTORS.md
+include environment.yml
+include requirements.txt
 include cbmpy/*
-include cbmpy/models/*
-include cbmpy/nosetests/*
 include cbmpy/fluxmodules/*

environment.yml

@@ -1,7 +1,7 @@
-name: cbmpy
+name: cbmpy3
 channels:
   - bgoli
-  - sbmlteam
+  - conda-forge
   - defaults
 dependencies:
   - biopython>=1.78
@@ -18,6 +18,7 @@ dependencies:
   - xlwt
   - cbmpy
   - pip
+  - packaging
   - pip:
     - swiglpk==4.65.1
-prefix: C:\Anaconda3\envs\cbmpy
+prefix: C:\Anaconda3\envs\cbmpy3

requirements.txt

@@ -1,4 +1,5 @@
 biopython
+packaging
 jedi==0.17.2
 ipython
 nose
@@ -11,4 +12,4 @@ sympy
 xlrd
 XlsxWriter
 xlwt
-cbmpy>=0.8.0
+cbmpy>=0.8.1

setup.py

@@ -31,7 +31,7 @@
 try:
     from setuptools import setup
 
-    install_requires_src = ['numpy']
+    install_requires_src = ['numpy', 'packaging']
     extras_requires_src = {
         'sympy': ['sympy'],
         'glpk': ['swiglpk',],
@@ -77,7 +77,7 @@
     # zip_safe = False,
     install_requires=install_requires_src,
     extras_requires=extras_requires_src,
-    requires=['numpy', 'sympy', 'libsbml', 'nose'],
+    requires=['numpy', 'sympy', 'python_libsbml', 'nose', 'packaging'],
     platforms=["Windows", "Linux", "Mac"],
     classifiers=[
         'Development Status :: 4 - Beta',