up Manifest

Author: olivierlabayle

Manifest.toml

@@ -116,9 +116,9 @@ version = "0.1.16"
 
 [[deps.BGZFStreams]]
 deps = ["CodecZlib"]
-git-tree-sha1 = "a9c80401403c068c02784cd53d417d3a82e2d2bd"
+git-tree-sha1 = "3aca54d25f8c30056577aa37ea68184da68df685"
 uuid = "28d598bf-9b8f-59f1-b38c-5a06b4a0f5e6"
-version = "0.3.1"
+version = "0.3.2"
 
 [[deps.Base64]]
 uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
@@ -277,9 +277,9 @@ version = "0.3.0"
 
 [[deps.Compat]]
 deps = ["UUIDs"]
-git-tree-sha1 = "4e88377ae7ebeaf29a047aa1ee40826e0b708a5d"
+git-tree-sha1 = "5ce999a19f4ca23ea484e92a1774a61b8ca4cf8e"
 uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
-version = "4.7.0"
+version = "4.8.0"
 weakdeps = ["Dates", "LinearAlgebra"]
 
     [deps.Compat.extensions]
@@ -343,10 +343,10 @@ uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a"
 version = "1.15.0"
 
 [[deps.DataFrames]]
-deps = ["Compat", "DataAPI", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrecompileTools", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"]
-git-tree-sha1 = "089d29c0fc00a190661517e4f3cba5dcb3fd0c08"
+deps = ["Compat", "DataAPI", "DataStructures", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrecompileTools", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"]
+git-tree-sha1 = "04c738083f29f86e62c8afc341f0967d8717bdb8"
 uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
-version = "1.6.0"
+version = "1.6.1"
 
 [[deps.DataStructures]]
 deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
@@ -382,10 +382,14 @@ uuid = "b552c78f-8df3-52c6-915a-8e097449b14b"
 version = "1.15.1"
 
 [[deps.Distances]]
-deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"]
-git-tree-sha1 = "49eba9ad9f7ead780bfb7ee319f962c811c6d3b2"
+deps = ["LinearAlgebra", "Statistics", "StatsAPI"]
+git-tree-sha1 = "b6def76ffad15143924a2199f72a5cd883a2e8a9"
 uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7"
-version = "0.10.8"
+version = "0.10.9"
+weakdeps = ["SparseArrays"]
+
+    [deps.Distances.extensions]
+    DistancesSparseArraysExt = "SparseArrays"
 
 [[deps.Distributed]]
 deps = ["Random", "Serialization", "Sockets"]
@@ -459,12 +463,6 @@ git-tree-sha1 = "335bfdceacc84c5cdf16aadc768aa5ddfc5383cc"
 uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93"
 version = "0.8.4"
 
-[[deps.Formatting]]
-deps = ["Printf"]
-git-tree-sha1 = "8339d61043228fdd3eb658d86c926cb282ae72a8"
-uuid = "59287772-0a20-5a39-b81b-1366585eb4c0"
-version = "0.4.2"
-
 [[deps.ForwardDiff]]
 deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"]
 git-tree-sha1 = "00e252f4d706b3d55a8863432e742bf5717b498d"
@@ -650,20 +648,24 @@ version = "1.0.0"
 
 [[deps.LoopVectorization]]
 deps = ["ArrayInterface", "ArrayInterfaceCore", "CPUSummary", "CloseOpenIntervals", "DocStringExtensions", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"]
-git-tree-sha1 = "b206c084b224dc16dbd8fce63dd34d5050e1e130"
+git-tree-sha1 = "c88a4afe1703d731b1c4fdf4e3c7e77e3b176ea2"
 uuid = "bdcacae8-1622-11e9-2a5c-532679323890"
-version = "0.12.164"
+version = "0.12.165"
 weakdeps = ["ChainRulesCore", "ForwardDiff", "SpecialFunctions"]
 
     [deps.LoopVectorization.extensions]
     ForwardDiffExt = ["ChainRulesCore", "ForwardDiff"]
     SpecialFunctionsExt = "SpecialFunctions"
 
 [[deps.LossFunctions]]
-deps = ["CategoricalArrays", "Markdown", "Statistics"]
-git-tree-sha1 = "44a7bfeb7b5eb9386a62b9cccc6e21f406c15bea"
+deps = ["Markdown", "Requires", "Statistics"]
+git-tree-sha1 = "065084a6e63bb30b622b46c613a8f61116787174"
 uuid = "30fc2ffe-d236-52d8-8643-a9d8f7c094a7"
-version = "0.10.0"
+version = "0.10.1"
+weakdeps = ["CategoricalArrays"]
+
+    [deps.LossFunctions.extensions]
+    LossFunctionsCategoricalArraysExt = "CategoricalArrays"
 
 [[deps.Lz4_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@@ -673,9 +675,9 @@ version = "1.9.3+0"
 
 [[deps.MLJBase]]
 deps = ["CategoricalArrays", "CategoricalDistributions", "ComputationalResources", "Dates", "DelimitedFiles", "Distributed", "Distributions", "InteractiveUtils", "InvertedIndices", "LinearAlgebra", "LossFunctions", "MLJModelInterface", "Missings", "OrderedCollections", "Parameters", "PrettyTables", "ProgressMeter", "Random", "ScientificTypes", "Serialization", "StatisticalTraits", "Statistics", "StatsBase", "Tables"]
-git-tree-sha1 = "4cc167b6c0a3ab25d7050e4ac38fe119e97cd1ab"
+git-tree-sha1 = "9094381ad079dde43c4c74a2f71926232f11cb12"
 uuid = "a7f614a8-145f-11e9-1d2a-a57a1082229d"
-version = "0.21.11"
+version = "0.21.12"
 
 [[deps.MLJGLMInterface]]
 deps = ["Distributions", "GLM", "MLJModelInterface", "StatsModels", "Tables"]
@@ -767,9 +769,9 @@ uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e"
 version = "0.5.5+0"
 
 [[deps.OrderedCollections]]
-git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282"
+git-tree-sha1 = "2e73fe17cac3c62ad1aebe70d44c963c3cfdc3e3"
 uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
-version = "1.6.0"
+version = "1.6.2"
 
 [[deps.PDMats]]
 deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
@@ -824,10 +826,10 @@ uuid = "54e16d92-306c-5ea0-a30b-337be88ac337"
 version = "0.4.1"
 
 [[deps.PrettyTables]]
-deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"]
-git-tree-sha1 = "331cc8048cba270591eab381e7aa3e2e3fef7f5e"
+deps = ["Crayons", "LaTeXStrings", "Markdown", "Printf", "Reexport", "StringManipulation", "Tables"]
+git-tree-sha1 = "ee094908d720185ddbdc58dbe0c1cbe35453ec7a"
 uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d"
-version = "2.2.5"
+version = "2.2.7"
 
 [[deps.Printf]]
 deps = ["Unicode"]
@@ -1117,9 +1119,9 @@ version = "5.10.1+6"
 
 [[deps.TMLE]]
 deps = ["AbstractDifferentiation", "CategoricalArrays", "Configurations", "Distributions", "GLM", "HypothesisTests", "LogExpFunctions", "MLJBase", "MLJGLMInterface", "MLJModels", "Missings", "PrecompileTools", "PrettyTables", "Random", "Statistics", "TableOperations", "Tables", "YAML", "Zygote"]
-git-tree-sha1 = "254382aa7b276278fc30aa172ea738830c059f77"
+git-tree-sha1 = "740f18f15d4b8d5ed1d5317f16525bf0f9917351"
 uuid = "8afdd2fb-6e73-43df-8b62-b1650cd9c8cf"
-version = "0.11.3"
+version = "0.11.4"
 
 [[deps.TOML]]
 deps = ["Dates"]