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2 parents e542859 + 4250e09 commit 44e82f3Copy full SHA for 44e82f3
subworkflows/parse_samplesheet/main.nf
@@ -35,7 +35,7 @@ workflow PARSE_SAMPLESHEET {
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validateSamplesheet(ch_samplesheet)
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log.info "[INFO] Samplesheet validated"
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- def sep = ch_samplesheet_file.name.endsWith('.tsv') ? '\t' : ','
+ def sep = params.samplesheet.endsWith('.tsv') ? '\t' : ','
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ch_samplesheet
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.splitCsv(header: true, sep: sep)
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.map { row ->
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