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Error when using plot function #381
Description
Hi all,
I met a strange problem which never exists before.
Every time I run cellphonedb plot heatmap_plot, I'll get errors like this
Warning message:
In options(stringsAsFactors = TRUE) :
'options(stringsAsFactors = TRUE)' is deprecated and will be disabled
Error: package or namespace load failed for ‘methods’:
.onLoad failed in loadNamespace() for 'methods', details:
call: assign(".methodsNamespace", where, baseenv())
error: cannot add binding of '.methodsNamespace' to the base environment
Error: package or namespace load failed for ‘datasets’:
.onLoad failed in loadNamespace() for 'methods', details:
call: assign(".methodsNamespace", where, baseenv())
error: cannot add binding of '.methodsNamespace' to the base environment
Error: package or namespace load failed for ‘utils’:
.onLoad failed in loadNamespace() for 'methods', details:
call: assign(".methodsNamespace", where, baseenv())
error: cannot add binding of '.methodsNamespace' to the base environment
Error: package or namespace load failed for ‘grDevices’:
.onLoad failed in loadNamespace() for 'methods', details:
call: assign(".methodsNamespace", where, baseenv())
error: cannot add binding of '.methodsNamespace' to the base environment
Error: package or namespace load failed for ‘graphics’:
.onLoad failed in loadNamespace() for 'methods', details:
call: assign(".methodsNamespace", where, baseenv())
error: cannot add binding of '.methodsNamespace' to the base environment
Error: package or namespace load failed for ‘stats’:
.onLoad failed in loadNamespace() for 'methods', details:
call: assign(".methodsNamespace", where, baseenv())
error: cannot add binding of '.methodsNamespace' to the base environment
Error: package or namespace load failed for ‘methods’:
.onLoad failed in loadNamespace() for 'methods', details:
call: assign(".methodsNamespace", where, baseenv())
error: cannot add binding of '.methodsNamespace' to the base environment
During startup - Warning messages:
1: package "methods" in options("defaultPackages") was not found
2: package ‘datasets’ in options("defaultPackages") was not found
3: package ‘utils’ in options("defaultPackages") was not found
4: package ‘grDevices’ in options("defaultPackages") was not found
5: package ‘graphics’ in options("defaultPackages") was not found
6: package ‘stats’ in options("defaultPackages") was not found
7: package ‘methods’ in options("defaultPackages") was not found
Error: .onLoad failed in loadNamespace() for 'methods', details:
call: assign(".methodsNamespace", where, baseenv())
error: cannot add binding of '.methodsNamespace' to the base environment
Fatal error: unable to initialize the JIT
Any suggestions for me?
Thank you inadvance!