Add Profile API to TileDB-R (#856) #245

	on:
	push:
	pull_request:

	name: pkgconfig

	permissions: read-all

	jobs:
	pkgconfig:
	runs-on: ${{ matrix.os }}
	name: ${{ matrix.os }} (r-${{ matrix.r }}) (${{ matrix.vendored }} libtiledb)

	strategy:
	fail-fast: false
	matrix:
	os:
	- ubuntu-latest
	r:
	- release
	# - devel
	vendored:
	- 'vendored'
	- 'system'
	include:
	- os: ubuntu-latest
	use-public-rspm: true
	# - os: ubuntu-latest
	# r: devel
	# http-user-agent: 'release'
	exclude:
	- os: macos-latest
	r: devel

	env:
	GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
	R_KEEP_PKG_SOURCE: yes
	_R_CHECK_FORCE_SUGGESTS_: "FALSE"
	_R_TILEDB_LIBTILEDB_: ${{ matrix.vendored }}

	steps:
	- uses: actions/checkout@v4

	- uses: r-lib/actions/setup-pandoc@v2

	- uses: r-lib/actions/setup-r@v2
	with:
	r-version: ${{ matrix.r }}
	http-user-agent: ${{ matrix.http-user-agent }}
	use-public-rspm: ${{ matrix.use-public-rspm }}

	- name: Setup libtiledb
	if: ${{ matrix.vendored == 'system' }}
	run: \|
	VERSION=$(grep version tools/tiledbVersion.txt \| cut -f 2 -d ':' \| tr -d '[:space:]')
	SHA=$(grep sha tools/tiledbVersion.txt \| cut -f 2 -d ':' \| tr -d '[:space:]')
	URL="https://github.com/TileDB-Inc/TileDB/releases/download/${VERSION}/tiledb-linux-x86_64-${VERSION}-${SHA}.tar.gz"
	mkdir -vp libtiledb
	cd libtiledb
	wget -O libtiledb.tar.gz ${URL}
	tar -xvzf libtiledb.tar.gz
	/usr/bin/sudo cp -Rv include/* /usr/local/include/
	/usr/bin/sudo cp -Rv lib/* /usr/local/lib/
	cd ..
	rm -rfv libtiledb
	sudo ldconfig

	- uses: r-lib/actions/setup-r-dependencies@v2
	with:
	extra-packages: local::.

	- name: Test tiledb::.pkg_config()
	run: Rscript tests/pkgconfig-test.R

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