Update TileDB core version (#369)

* Update TileDB core version

* Fix TileDB-Py dependency error

Author: NikolaosPapailiou

apis/python/requirements-py.txt

@@ -1,4 +1,4 @@
 numpy==1.24.3
 tiledb-cloud==0.10.24
-tiledb==0.28.0
+tiledb==0.29.0
 scikit-learn==1.3.2

apis/python/src/tiledb/vector_search/index.py

@@ -533,19 +533,16 @@ def clear_history(
                 updates_array_uri = group[
                     storage_formats[storage_version]["UPDATES_ARRAY_NAME"]
                 ].uri
-                with tiledb.open(updates_array_uri, "m") as A:
-                    A.delete_fragments(0, timestamp)
+                tiledb.Array.delete_fragments(updates_array_uri, 0, timestamp)
 
             if index_type == "FLAT":
                 db_uri = group[storage_formats[storage_version]["PARTS_ARRAY_NAME"]].uri
-                with tiledb.open(db_uri, "m") as A:
-                    A.delete_fragments(0, timestamp)
+                tiledb.Array.delete_fragments(db_uri, 0, timestamp)
                 if storage_formats[storage_version]["IDS_ARRAY_NAME"] in group:
                     ids_uri = group[
                         storage_formats[storage_version]["IDS_ARRAY_NAME"]
                     ].uri
-                    with tiledb.open(ids_uri, "m") as A:
-                        A.delete_fragments(0, timestamp)
+                    tiledb.Array.delete_fragments(ids_uri, 0, timestamp)
             elif index_type == "IVF_FLAT":
                 db_uri = group[storage_formats[storage_version]["PARTS_ARRAY_NAME"]].uri
                 centroids_uri = group[
@@ -555,14 +552,10 @@ def clear_history(
                     storage_formats[storage_version]["INDEX_ARRAY_NAME"]
                 ].uri
                 ids_uri = group[storage_formats[storage_version]["IDS_ARRAY_NAME"]].uri
-                with tiledb.open(db_uri, "m") as A:
-                    A.delete_fragments(0, timestamp)
-                with tiledb.open(centroids_uri, "m") as A:
-                    A.delete_fragments(0, timestamp)
-                with tiledb.open(index_array_uri, "m") as A:
-                    A.delete_fragments(0, timestamp)
-                with tiledb.open(ids_uri, "m") as A:
-                    A.delete_fragments(0, timestamp)
+                tiledb.Array.delete_fragments(db_uri, 0, timestamp)
+                tiledb.Array.delete_fragments(centroids_uri, 0, timestamp)
+                tiledb.Array.delete_fragments(index_array_uri, 0, timestamp)
+                tiledb.Array.delete_fragments(ids_uri, 0, timestamp)
             group.close()
 
 

pyproject.toml

@@ -19,7 +19,7 @@ classifiers = [
 
 dependencies = [
     "tiledb-cloud>=0.11",
-    "tiledb>=0.28.0",
+    "tiledb>=0.29.0",
     "typing-extensions", # for tiledb-cloud indirect, x-ref https://github.com/TileDB-Inc/TileDB-Cloud-Py/pull/428
     "scikit-learn",
 ]

src/cmake/Modules/FindTileDB_EP.cmake

@@ -54,13 +54,13 @@ else()
     # Try to download prebuilt artifacts unless the user specifies to build from source
     if(DOWNLOAD_TILEDB_PREBUILT)
         fetch_prebuilt_tiledb(
-                VERSION 2.22.0
-                RELLIST_HASH SHA256=6ae0c1558f400cbee68b40810d29ad2cd0398e55378d158a9aafa3cd36b089b1
+                VERSION 2.23.0
+                RELLIST_HASH SHA256=2221b0ee2af2675d69f9cb31bc22062d3f379eeecc83b5fc713d00fa03d6e56f
         )
     else() # Build from source
         fetch_source_tiledb(
-                VERSION 2.22.0
-                RELLIST_HASH SHA256=6ae0c1558f400cbee68b40810d29ad2cd0398e55378d158a9aafa3cd36b089b1
+                VERSION 2.23.0
+                RELLIST_HASH SHA256=2221b0ee2af2675d69f9cb31bc22062d3f379eeecc83b5fc713d00fa03d6e56f
         )
     endif()